Table 5. Putatively functional SNPs imputed from the ATM locus associated with the risk of NHL.

SNP	r2 with tSNP*	OR (95% CI)	P	phastCons 44-way	TFBS	H3K4me1 chromatin mark	DNase I Hypersensitivity cluster	UTR	Transcribed in GM12878
rs228594	0.991	0.71 (0.60–0.84)	4.85E-05	-	JunD, FOSL2	-	Yes	-	Yes
rs228599	0.991	0.71 (0.60–0.84)	4.85E-05	-	c-Jun	Yes	-	-	Yes
rs227070	0.997	0.71 (0.61–0.84)	7.32E-05	-	-	-	Yes	-	-
rs228595	1	1.16 (1.05–1.29)	0.003922	-	-	Yes	-	-	Yes
rs672655	0.994	0.89 (0.80–0.98)	0.02264	243	-	-	-	-	Yes
rs228596	0.994	0.89 (0.80–0.98)	0.02295	-	-	Yes	-	-	Yes
rs189037	0.994	0.89 (0.80–0.98)	0.02296	-	HEY1, TAF1, IRF4, PAX5-C20, POU2F2	-	-	5′	Yes
rs662578	0.994	0.90 (0.81–0.99)	0.03296	-	-	-	Yes	-	Yes
rs228590	0.994	0.90 (0.81–0.99)	0.03476	-	PAX5-C20	Yes	Yes	-	Yes
rs228598	0.994	0.90 (0.81–0.99)	0.03476	-	c-Jun	Yes	Yes	-	Yes
rs228591	0.994	0.90 (0.81–0.99)	0.03476	-	-	Yes	Yes	-	Yes
rs625120	0.994	0.90 (0.81–0.99)	0.03476	-	-	Yes	-	-	Yes
rs228597	0.994	0.90 (0.81–0.99)	0.03476	-	-	Yes	-	-	Yes
rs228592	0.994	0.90 (0.81–0.99)	0.03476	-	-	-	Yes	-	Yes
rs582157	0.994	0.90 (0.81–0.99)	0.03476	-	-	Yes	-	-	Yes
rs227072	0.998	0.90 (0.81–1.00)	0.04007	-	JunD	-	-	-	Yes
rs425061	0.998	0.90 (0.81–1.00)	0.04007	272	-	-	-	-	Yes
rs227092	0.998	0.90 (0.81–1.00)	0.04007	-	-	-	-	3′	Yes
rs227091	0.998	0.90 (0.81–1.00)	0.04007	-	-	-	-	3′	Yes
rs4585	0.998	0.90 (0.81–1.00)	0.04007	-	-	-	-	3′	Yes

OR = odds ratio; CI = confidence interval; TFBS = transcription factor binding site; UTR = untranslated region.

*Correlated tSNP for rs228595 is rs611646; all other SNPs are correlated with the tSNP rs419716.