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. 2014 Jun 30;15(1):539. doi: 10.1186/1471-2164-15-539

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© Chen et al.; licensee BioMed Central Ltd. 2014

This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Chromosome ideograms of CTCF. Peaks are plotted on the chromosome ideograms at their positions. The information of exact position and nearest gene will appear if the mouse pointer hovers over the peak. Clicking on the peak will link to the UCSC genome browser. There are 10 different colors available for selection: blue, pink, green, yellow, gold, purple, aqua, fuchsia, silver, and red. The user may plot different datasets on the same ideogram with different colors. To plot additional peaks, the user can clear all marks with the “clear all peaks” button.