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. 2013 Dec;26(12):1665–1671. doi: 10.5713/ajas.2013.13199

Table 1.

Selected candidate reference genes used in the qRT-PCR assay indicating name, GenBank accession number, annealing temperature (Ta), PCR efficiency, slope, regression coefficient and primers used for the expression study

Gene Full gene name GenBank accession number Ta (°C) PCR efficiency (%) Slope Regression coefficient (r2) Forward primer (5′-3′) Reverse primer (5′-3′)
ACTB Beta-actin DQ845171 62 99.66 −3.33 0.998 TGCCCTGAGGCTCTCTTCCA TGCGGATGTCGACGTCACA
GAPDH Glyceraldehyde-3-phosphate dehydrogenase AF017079 62 96.84 −3.40 0.998 GCAAGTTCCACGGCACAGTC CCCACTTGATGTTGGCAGGA
TBP TATA box-binding protein DQ845178 62 94.92 −3.45 0.993 AAAGACCATTGCACTTCGTGC ATATCAGTGCGGTGGTGCG
HPRT1 Hypoxanthine phosphoribosyltransferase 1 DQ845175 60 102.21 −3.27 0.998 ATTATGGACAGGACCGAACGG CCAACAGGTCGGCAAAGAACT
YWHAZ Tyrosine 3-monooxygenase/tryptophan 5-Monooxygenase activation protein zeta polypeptide DQ845179 60 98.84 −3.35 0.999 CCAACGCTTCACAAGCAGAGA TGCTTGCTGTGACTGGTCCA
HMBS Hydroxymethylbilane synthase mRNA DQ845174 60 97.63 −3.39 0.998 AGCATGCCTTGGAGAGGAATG CGCTTGCAGACAGCTCCAAT
18S 18 S ribosomal RNA DQ222453.1 60 95.68 −3.43 0.993 CGGCTACCACATCCAAGGAA GCTGGAATTACCGCGGCT
EEF1A2 Eukaryotic translation elongation factor 1 alpha 2 BC108110.1 60 101.78 −3.29 0.997 CGACTGGCCACCTCATCTACA CCAGGCATACTTGAAGGAGCC