Table 3.
SNP | Exon | AA change | Genotype frequency (N) | H1 | MAF2 | HWE3 | ||
---|---|---|---|---|---|---|---|---|
c.181T>G | 2 | L41V | TT 1.000 (44) |
TG 0.000 (0) |
GG 0.000 (0) |
0.00 | 0.00 | - |
c.193T>G | 2 | L45V | TT 1.000 (44) |
TG 0.000 (0) |
GG 0.000 (0) |
0.00 | 0.00 | - |
c.212C>A | 2 | T51N | CC 1.000 (44) |
CA 0.000 (0) |
AA 0.000 (0) |
0.00 | 0.00 | - |
c.280A>G | 2 | I74V | AA 0.386 (17) |
AG 0.409 (18) |
GG 0.205 (9) |
0.48 | 0.41 | 0.429 |
c.352T>G | 3 | W98G | TT 1.000 (44) |
TG 0.000 (0) |
GG 0.000 (0) |
0.00 | 0.00 | - |
c.364T>C | 3 | S102P | TT 1.000 (44) |
TC 0.000 (0) |
CC 0.000 (0) |
0.00 | 0.00 | - |
c.388G>A | 3 | V110M | GG 0.591 (26) |
GA 0.341 (15) |
AA 0.068 (3) |
0.36 | 0.28 | 0.681 |
c.408G>C | 3 | L116L | GG 0.363 (16) |
GC 0.477 (21) |
CC 0.160 (8) |
0.47 | 0.44 | 0.808 |
c.456A>G | 4 | A132A | AA 0.386 (17) |
AG 0.409 (18) |
GG 0.205 (9) |
0.48 | 0.41 | 0.429 |
Heterozygosity.
Minor allele frequency.
p-value for testing Hardy-Weinberg equilibrium.