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Average linkage disequilibrium (LD) over all autosomal chromosomes within 5 Mb distances between the pairs of SNPs for Sapsaree dogs. The upper and lower 3 lines correspond to D′ and r2 measures for the three samples (Sap134, Sap60 and Sap183), in which the SNP panels of 20K, 170K, and the combined SNP set of 20K and 170K were used using 134, 60, and 183 individuals, respectively.
