Table 4.
Gene Ontology terms overrepresented in the red module related to marbling score by DAVID tool
| Category | GO terms | p-value | Gene symbols |
|---|---|---|---|
| Biological process | Transmembrane transport (GO:0055085) | 0.012 | CACNA1B,CNGB1,SCN5A,SLC8A3,KCNH1,SLC46A1,ATP4A,RANBP2,TAP2,NUP85 |
| Regulation of biological quality (GO:0065008) | 0.041 | DTNBP1,SLC9A3R1,CACNA1B,NPPA,IL6,TXNDC13,PCSK2,CHRNE,COL9A1,INHBA,APTX,RB1 | |
| Salivary gland morphogenesis ( GO:0007435) | 0.047 | IL6,FGFR2 | |
| Molecular function | Protein binding (GO:0005515) | 0.029 | NPPA,FTSJD2,NUP85,LRRC20,CIAO1,SCN5A,PITPNA,CD3G,IBSP,RANBP2,VAPB,TAGLN2,ATF7,FBXL20,APTX,RB1,FABP5,BAIAP2,LMNA,KCNH1,C22H3orf60,WBP1,JUN,TAF1B,JARID1C,CUL7,CXCL10,INHBA,MYLIP,DTNBP1,VPS45,MGC148992,VPS36,HIT,VPS26A,LRG1,SHF,DPH3,RAB7A,PCSK2,IL6,NPBWR1,FGFR2,CNPY3,TCHP |
| RNA binding (GO:0003723) | 0.046 | ILF3,TRUB2,RBM18,EIF4H,RPS20,CSTF2,SFRS10,APTX | |
| Cellular component | Phosphoglycolate phosphatase activity (GO:0008967) | 0.046 | PGP,APTX |
| Nuclear envelope (GO:0005635) | 0.013 | TAGLN2,LMNA,IPO4,RANBP2,NUP85 | |
| Nuclear membrane (GO:0031965) | 0.027 | TAGLN2,LMNA,NUP85 | |
| Endomembrane system (GO:0012505) | 0.035 | TAGLN2,LMNA,IPO4,RANBP2,ST3GAL2,VPS26A,NUP85,VAPB | |
| Nuclear pore (GO:0005643) | 0.040 | IPO4,RANBP2,NUP85 |