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. 2013 Mar;26(3):323–333. doi: 10.5713/ajas.2012.12500

Table 2.

Information of 20 microsatellite loci

Locus Primer sequence (5′- 3′) Chromosome Allele number Fluorescent marker Annealing temperature (°C) Fragment size
ILSTS029 TGTTTTGATGGAACACAGCC
TGGATTTAGACCAGGGTTGG
1 9 NED 53 152–180
OarFCB20 AAATGTGTTTAAGATTCCATACAGTG
GGAAAACCCCCATATATACCTATAC
2 11 6FAM 55 82–104
MAF70 CACGGAGTCACAAAGAGTCAGACC
GCAGGACTCTACGGGGCCTTTGC
4 10 PET 60 142–184
MCM527 GTCCATTGCCTCAAATCAATTC
AAACCACTTGACTACTCCCCAA
5 11 NED 58 151–173
ILSTS087 AGCAGACATGATGACTCAGC
CTGCCTCTTTTCTTGAGAGC
6 11 PET 52 138–158
SPS113 CCTCCACACAGGCTTCTCTGACTT
CCTAACTTGCTTGAGTTATTGCCC
7 9 PET 58 130–152
ILSTS005 GGAAGCAATGAAATCTATAGCC
TGTTCTGTGAGTTTGTAAGC
7 8 6FAM 55 181–216
ILSTS011 GCTTGCTACATGGAAAGTGC
CTAAAATGCAGAGCCCTACC
9 11 6FAM 58 268–282
SRCRSP3 CGGGGATCTGTTCTATGAAC
TGATTAGCTGGCTGAATGTCC
10 7 NED 55 107–123
CSRD247 GGACTTGCCAGAACTCTGCAAT
CACTGTGGTTTGTATTAGTCAGG
14 10 VIC 58 211–246
INRA063 ATTTGCACAAGCTAAATCTAACC
AAACCACAGAAATGCTTGGAAG
14 9 NED 58 165–199
MAF065 AAAGGCCAGAGTATGCAATTAGGAG
CCACTCCTCCTGAGAATATAACATG
15 14 VIC 55 113–147
OarFCB48 GACTCTAGAGGATCGCAAAGAACCAG
GAGTTAGTACAAGGATGACAAGAGGCAC
17 7 6FAM 57 138–178
MAF209 TCATGCACTTAAGTATGTAGGATGCTG
GATCACAAAAAGTTGGATACAACCGTGG
17 8 VIC 55 87–103
BMS1494 TCTGGAGCTTGCAAAAGACC
AATGGATGACTCCTGGATGG
18 7 6FAM 55 227–237
SRCRSP5 GGACTCTACCAACTGAGCTACAAG
TGAAATGAAGCTAAAGCAATGC
18 12 VIC 58 152–182
BM1818 AGCTGGGAATATAACCAAAGG
AGTGCTTTCAAGGTCCATGC
20 7 VIC 50 200–284
OarFCB304 CCCTAGGAGCTTTCAATAAAGAATCGG
CGCTGCTGTCAACTGGGTCAGGG
22 15 VIC 55 150–188
DRBP1 ATGGTGCAGCAGCAAGGTGAGCA
GGGACTCAGTCTCTCTATCTCTTTG
23 16 PET 53 106–154
OarAE54 TACTAAAGAAACATGCTCCCAC
AGAAACATTTATTCTTATCCTCAGTG
25 14 6FAM 56 112–134

NED: Black fluorescent; 6FAM: Blue fluorescent; PET: Red fluorescent; VIC: Green fluorescent.