Table 1.

The investigated 150 MS markers for Korean native chicken lines. The numbers of alleles are indicated, and the selected 15 MS markers are in bold

Marker	Chr.	Map position (cM)	No. of allele	Allele Size (bp)	Marker	Chr.	Map position (cM)	No. of allele	Allele size(bp)	Marker	Chr.	Map position (cM)	No. of allele	Allele size (bp)
MCW0248	1	21	3	215–223	MCW0016	3	247	5	134–146	GCT0016	9	41	8	108–154
ADL0160	1	33	2	113–133	GCT0053	3	263	5	128–154	ADL0191	9	44	6	128–150
LEI0194	1	81	7	130–174	ADL0237	3	275	8	133–153	ADL0021	9	53	8	166–188
MCW0111	1	118	5	98–106	MCW0040	3	282	8	129–147	ADL0259	9	122	9	106–146
ADL0188	1	133	6	145–165	LEI0166	3	300	3	346–356	MCW0134	9	132	7	260–284
MCW0297	1	162	7	288–304	MCW0037	3	317	3	152–156	MCW0228	10	0	6	221–239
LEI0146	1	169	5	248–268	ADL0143	4	0	4	152–166	MCW0067	10	59	3	176–182
MCW0106	1	94	3	125–131	ADL0255	4	3	4	97–109	ADL0158	10	101	4	188–204
MCW0101	1	248	4	274–280	ADL0317	4	12	9	174–216	ADL0112	10	120	3	127–133
ADL0268	1	288	5	105–117	ADL0203	4	35	7	168–194	MCW0097	11	18	3	267–273
LEI0108	1	300	10	256–310	MCW0295	4	75	5	88–100	ADL0123	11	22	3	106–138
LEI0169	1	400	5	232–248	ADL0241	4	80	7	201–215	MCW0332	12	90	2	196–200
LEI0107	1	424	8	206–240	ADL0246	4	112	9	146–164	ADL0147	13	32	4	211–217
MCW0145	1	455	7	182–210	ADL0194	4	118	4	198–214	LEI0251	13	47	12	98–132
MCW0020	1	460	4	183–189	ROS0024	4	148	6	312–328	MCW0216	13	47	4	136–146
LEI0134	1	527	6	291–311	LEI0094	4	153	9	246–280	ADL0310	13	51	10	132–158
MCW0107	1	565	4	110–118	MCW0098	4	217	2	260–262	ROS0083	13	55	7	109–129
LEI0234	2	50	10	217–315	LEI0085	4	231	5	245–259	MCW0322	13	67	3	252–268
MCW0131	2	102	6	196–216	MCW0263	5	28	4	227–249	MCW0104	13	74	11	188–226
MCW0206	2	104	5	226–240	MCW0193	5	50	9	298–318	ADL0200	14	16	7	112–138
ADL0176	2	116	5	184–200	ROS0013	5	79	8	220–236	LEI0098	14	37	6	150–170
MCW0063	2	119	8	132–150	ADL0292	5	83	7	112–138	MCW0123	14	45	5	80–90
ADL0217	2	121	4	150–156	MCW0214	5	88	10	268–302	MCW0080	15	49	4	270–280
MCW0065	2	142	6	98–122	MCW0078	5	93	3	135–143	ADL0293	17	26	7	105–119
LEI0089	2	165	6	182–200	LEI0145	5	98	11	303–333	MCW0330	17	41	4	254–286
MCW0039	2	202	5	128–142	MCW0223	5	123	4	177–195	MCW0151	17	57	6	250–266
MCW0034	2	233	7	217–237	MCW0029	5	128	11	137–187	ADL0304	18	7	8	127–161
LEI0096	2	233	6	216–240	MCW0081	5	151	2	113–131	MCW0219	18	47	4	224–240
ADL0181	2	241	3	175–179	ADL0166	5	162	9	124–162	MCW0266	19	0	3	163–175
MCW0173	2	243	12	230–272	ADL0298	5	198	6	105–121	MCW0119	20	0	7	102–142
MCW0087	2	252	9	267–287	MCW0014	6	50	4	173–187	ADL0324	20	18	6	157–181
MCW0009	2	261	2	162–172	MCW0250	6	59	5	226–240	ADL0034	20	26	6	111–121
MCW0137	2	273	7	240–264	ADL0230	6	63	6	105–115	SLC2A1	21	71.04	2	293–295
MCW0288	2	275	5	108–118	ADL0159	6	67	10	78–126	ADL0262	23	0	3	105–109
LEI0070	2	379	11	177–213	MCW0120	7	44	10	258–286	MCW0165	23	1	3	114–118
ROS0074	2	302	3	315–321	MCW0201	7	79	4	299–309	ADL0289	23	7	3	173–177
MCW0264	2	320	6	224–240	MCW0183	7	86	3	291–319	MCW0301	24	48	6	264–292
GCT0002	2	349	5	154–172	ADL0279	7	92	8	87–115	MCW0285	26	38	7	179–195
MCW0282	2	378	5	286–310	ROS0019	7	101	10	119–147	MCW0069	26	47	7	155–173
LEI0141	2	382	8	220–242	MCW0236	7	109	6	306–328	LEI0074	26	67	6	224–240
MCW0157	2	474	6	285–297	MCW0316	7	127	2	158–186	MCW0300	27	11	3	122–130
MCW0261	3	0	8	225–251	ADL0315	7	140	2	245–247	ROS0073	22	0	4	280–292
MCW0083	3	51	5	78–86	MCW0275	8	6	3	128–150	LEI0135	28	0	6	132–142
MCW0222	3	85	4	217–223	ROS0026	8	14	6	109–119	ROS0249	32	20	4	148–162
MCW0212	3	154	3	192–206	MCW0095	8	26	5	72–82	ADL0273	Z	73	4	144–168
ADL0248	3	164	7	122–158	MCW0160	8	35	5	205–229	ADL0201	Z	87	4	138–144
MCW0127	3	167	8	227–247	ADL0154	8	46	8	125–171	MCW0154	Z	95	3	170–186
MCW0103	3	201	2	267–271	ADL0278	8	94	4	111–119	LEI0144	Z	131	4	251–269
MCW0224	3	218	4	292–300	MCW0351	8	105	5	149–159	LEI0121	Z	131	3	257–273
MCW0126	3	231	3	112–132	ROS0078	9	0	16	172–246	LEI0075	Z	165	8	164–200