Table 1. Genome sequencing project information and genome statistics of IIV-22.
MIGS ID | Property | Term |
MIGS-31 | Finishing quality | Finished (>99 %) |
Number of contigs | 1 | |
Assembly size | 197 693 bp | |
Assembly coverage | 81× | |
Total number of reads used | 42 828 | |
MIGS-29 | Sequencing platform | 454 |
MIGS-30 | Assemblers | Newbler version 2.3 Post-release 11.19.2009 |
Gene calling method | Annotation protocol (Bigot et al., 2009) | |
EMBL ID | HF920633 | |
Attribute | Value | % of total |
Size (bp) | 197 693 | 100 |
G+C content (mol%) | 55 529 | 28.05 |
Coding region (bp) | 170 799 | 86.4 |
Pseudogenes | 1 | 100 |
Total genes (putatively functional) | 167 | 100 |
Protein coding genes with function prediction | 67 | 40.1 |
Protein coding genes with orthologues in databases | 166 | 99.4 |
Family of gene paralogues | 3 | – |
Genes in families of paralogous genes | 22 | 12.6 |
Non-coding regions over 200 bp | 11 801 (16 segments) | 6 |