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. 2014 Jun;88(11):5967–5976. doi: 10.1128/JVI.00088-14

TABLE 2.

P1, 3CD, and whole-genome amino acid sequence distances between mandrill variants and other species

Species and subgroup Amino acid sequence distancea
Whole genome P1 2C + 3CD
EV-J 0.264 0.384 0.1682
EV-C 0.403 0.514 0.2934
EV-A
    All 0.351 0.3714 0.3334
    A1 0.3595 0.379 0.341
    A2 0.3235 0.346 0.3074
EV-B
    All 0.2981 0.5107 0.158
    Human 0.2996 0.511 0.1596
    SA5 0.2489 0.493 0.0613
EV-C 0.4034 0.514 0.2934
EV-D 0.375 0.463 0.2853
EV-H 0.3905 0.465 0.3085
a

Amino acid sequence distances below species assignment thresholds are shown in boldface type (complete coding region, 30%; P1, 40%; 2C plus 3CD, 30%).