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. 2014 Jun 9;46(1):37. doi: 10.1186/1297-9686-46-37

Table 2.

Correlation between true ( g ) and predicted ( ĝ ) breeding values in the Angus (PV) and multibreed (MV) validation populations

 
 
 
 
(gPV,ĝPV|PT)

 
r(gMV,ĝMV|PT)

Type of phenotype Model h 2 c n = 1000 n = 2250   n = 1000 n = 2250
Continuous
Linear
0.10
-
0.12 ± 0.02
0.31 ± 0.02
 
0.04 ± 0.01
0.23 ± 0.02
 
 
0.25
-
0.28 ± 0.03
0.51 ± 0.02
 
0.21 ± 0.02
0.41 ± 0.02
 
 
0.50
-
0.55 ± 0.02
0.66 ± 0.02
 
0.42 ± 0.02
0.53 ± 0.01
Categorical
Threshold
0.10
2
0.04 ± 0.02
0.14 ± 0.02
 
0.01 ± 0.01
0.09 ± 0.02
 
 
 
3
0.05 ± 0.01
0.13 ± 0.03
 
0.03 ± 0.01
0.09 ± 0.02
 
 
 
4
0.07 ± 0.01
0.14 ± 0.02
 
0.02 ± 0.01
0.10 ± 0.02
 
 
0.25
2
0.15 ± 0.03
0.29 ± 0.03
 
0.10 ± 0.02
0.22 ± 0.08
 
 
 
3
0.15 ± 0.03
0.32 ± 0.03
 
0.11 ± 0.02
0.24 ± 0.02
 
 
 
4
0.16 ± 0.03
0.34 ± 0.03
 
0.10 ± 0.02
0.27 ± 0.02
 
 
0.50
2
0.32 ± 0.02
0.51 ± 0.02
 
0.26 ± 0.02
0.41 ± 0.02
 
 
 
3
0.36 ± 0.02
0.53 ± 0.02
 
0.28 ± 0.02
0.43 ± 0.02
 
 
 
4
0.38 ± 0.02
0.55 ± 0.02
 
0.29 ± 0.02
0.44 ± 0.02
Categorical
Linear
0.10
2
0.04 ± 0.01
0.04 ± 0.01
 
0.01 ± 0.01
0.01 ± 0.01
 
 
 
3
0.04 ± 0.01
0.04 ± 0.01
 
0.01 ± 0.01
0.01 ± 0.01
 
 
 
4
0.03 ± 0.01
0.03 ± 0.01
 
0.01 ± 0.01
0.01 ± 0.01
 
 
0.25
2
0.09 ± 0.02
0.23 ± 0.03
 
0.08 ± 0.02
0.18 ± 0.02
 
 
 
3
0.09 ± 0.02
0.23 ± 0.03
 
0.06 ± 0.02
0.18 ± 0.03
 
 
 
4
0.05 ± 0.01
0.24 ± 0.03
 
0.03 ± 0.01
0.19 ± 0.02
 
 
0.50
2
0.25 ± 0.03
0.46 ± 0.02
 
0.20 ± 0.02
0.38 ± 0.02
 
 
 
3
0.26 ± 0.03
0.48 ± 0.02
 
0.19 ± 0.02
0.38 ± 0.02
      4 0.29 ± 0.03 0.50 ± 0.03   0.20 ± 0.02 0.39 ± 0.02

Results are given for Bayes C π linear model analysis of continuous phenotypes and Bayes C π linear or threshold model analysis of ordinal categorical phenotypes classified (c) as 2, 3 or 4 categories with heritabilities (h2) of 0.10, 0.25 or 0.50 in the Angus training (PT) population with (n) 1000 or 2250 observations.