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. 2014 Apr 21;197(3):899–912. doi: 10.1534/genetics.114.165241

Table 1. Genes deregulated in the Ms2Yah mice hippocampi.

Group Gene name Chr WT: mean ± SEM Ms2Yah: mean ± SEM FC Test: posthoc
1 Cldn5 16 0.77 ± 0.15 0.52 ± 0.09 0.68 *
1 Cbs 17 0.9 ± 0.12 0.62 ± 0.05 0.69 *
1 Tmem234 4 0.84 ± 0.1 0.63 ± 0.07 0.75 *
1 Rps2 17 0.98 ± 0.08 0.74 ± 0.07 0.76 *
1 Fam40b/Strip2 6 0.95 ± 0.06 0.72 ± 0.08 0.76 *
1 Tek 4 0.85 ± 0.1 0.66 ± 0.14 0.77 **
1 Ggcx 6 0.99 ± 0.04 0.76 ± 0.09 0.77 *
1 Sox2 3 0.86 ± 0.11 0.67 ± 0.15 0.78 *
1 Hist1h1c 13 1.05 ± 0.15 0.82 ± 0.08 0.78 *
1 Hyou1 9 0.89 ± 0.08 0.69 ± 0.09 0.78 *
1 Copg 6 0.9 ± 0.07 0.7 ± 0.08 0.78 **
1 Slco1c1 6 0.95 ± 0.1 0.74 ± 0.12 0.79 *
1 Gm12696 4 0.71 ± 0.13 0.56 ± 0.12 0.79 *
1 Elk1 X 0.9 ± 0.08 0.71 ± 0.06 0.79 *
1 Gm11599 1 1.02 ± 0.07 0.8 ± 0.06 0.79 *
1 Spsb3 17 0.93 ± 0.04 0.73 ± 0.09 0.79 *
1 Slc39a1 3 1.04 ± 0.09 0.82 ± 0.15 0.79 *
1 2810006K23Rik 5 0.92 ± 0.06 0.73 ± 0.1 0.79 *
1 Tbl3 17 1.07 ± 0.12 0.85 ± 0.07 0.79 *
1 Msl3l2 10 0.96 ± 0.04 0.76 ± 0.12 0.8 *
1 Slc37a3 6 0.88 ± 0.05 0.7 ± 0.12 0.8 *
1 Smyd5 6 0.93 ± 0.09 0.74 ± 0.09 0.8 *
1 Hmcn1 1 0.87 ± 0.08 0.7 ± 0.09 0.8 ***
1 Anapc1 2 0.97 ± 0.05 0.77 ± 0.17 0.8 *
2 Dlg1 16 0.87 ± 0.08 1.04 ± 0.1 1.2 *
2 Kcnn3 3 1.04 ± 0.05 1.25 ± 0.13 1.2 *
2 B430305J03Rik 3 1.08 ± 0.07 1.29 ± 0.1 1.2 *
2 Trp53inp1 4 1.12 ± 0.13 1.35 ± 0.15 1.2 *
2 Gdpd2 X 0.95 ± 0.04 1.14 ± 0.07 1.21 *
2 Gabrr2 4 1.28 ± 0.13 1.55 ± 0.09 1.21 *
2 Gm7820 X 1.09 ± 0.04 1.31 ± 0.12 1.21 *
2 Kitl 10 0.88 ± 0.07 1.06 ± 0.08 1.21 *
2 AI836003 15 1.05 ± 0.03 1.26 ± 0.1 1.21 *
2 Cav3 6 0.97 ± 0.04 1.17 ± 0.1 1.21 *
2 S100a10 3 0.91 ± 0.07 1.1 ± 0.1 1.21 *
2 Vma21 X 1.08 ± 0.15 1.31 ± 0.03 1.21 *
2 Figf X 0.93 ± 0.15 1.13 ± 0.12 1.22 *
2 2210404J11Rik 17 0.98 ± 0.07 1.2 ± 0.13 1.23 *
2 Trhr 15 0.66 ± 0.14 0.81 ± 0.09 1.23 *
2 Tsc22d3 X 1.23 ± 0.26 1.52 ± 0.19 1.23 *
2 Gm4876 6 0.91 ± 0.09 1.12 ± 0.11 1.24 *
2 Arrdc2 8 1.19 ± 0.11 1.47 ± 0.21 1.24 *
2 Cpsf7 19 0.85 ± 0.11 1.06 ± 0.07 1.24 *
2 Cntn6 6 0.92 ± 0.08 1.14 ± 0.13 1.24 *
2 Dclre1b 3 1.05 ± 0.07 1.31 ± 0.16 1.25 **
2 Cacna1g 11 0.92 ± 0.06 1.16 ± 0.14 1.26 *
2 Huwe1 X 1.1 ± 0.11 1.39 ± 0.13 1.26 *
2 Fam70a X 0.92 ± 0.09 1.16 ± 0.12 1.26 *
2 Gm129 3 1.12 ± 0.26 1.41 ± 0.24 1.26 *
2 Gabrr1 4 1.03 ± 0.05 1.31 ± 0.05 1.27 **
2 Gm9801 7 0.95 ± 0.08 1.21 ± 0.14 1.27 *
2 Anapc1 2 0.95 ± 0.15 1.2 ± 0.08 1.27 *
2 Thpo 16 1.03 ± 0.1 1.31 ± 0.1 1.27 *
2 Park2 17 1.21 ± 0.14 1.55 ± 0.08 1.28 **
2 Gm5148 3 0.96 ± 0.08 1.22 ± 0.13 1.28 *
2 Rnf7 9 0.96 ± 0.04 1.23 ± 0.13 1.28 *
2 Bmp2 2 0.99 ± 0.06 1.26 ± 0.17 1.28 *
2 Cit 5 0.92 ± 0.06 1.18 ± 0.09 1.28 *
2 Uevld 7 0.86 ± 0.07 1.11 ± 0.14 1.28 *
2 Usp54 14 1.12 ± 0.09 1.44 ± 0.25 1.29 *
2 Rnu1b1 3 1.01 ± 0.02 1.31 ± 0.09 1.29 **
2 1700048O20Rik 9 1.07 ± 0.03 1.39 ± 0.13 1.29 *
2 Brunol5 4 1 ± 0.11 1.3 ± 0.15 1.3 *
2 Eltd1 3 1.08 ± 0.12 1.42 ± 0.31 1.32 *
2 Carhsp1 16 1.06 ± 0.09 1.4 ± 0.17 1.32 *
2 Dhrs1 14 0.98 ± 0.12 1.31 ± 0.14 1.33 *
2 Mybl1 1 1.07 ± 0.11 1.44 ± 0.22 1.35 *
2 Dnahc3 7 0.98 ± 0.07 1.33 ± 0.25 1.36 *
2 Mir692-1 17 0.8 ± 0.14 1.09 ± 0.11 1.36 *
2 Gpr4 7 0.89 ± 0.09 1.22 ± 0.14 1.37 *
2 mIRNAAL589870 UN 1.08 ± 0.13 1.49 ± 0.16 1.37 **
2 Rin3 12 1.06 ± 0.04 1.48 ± 0.25 1.39 *
2 Camk2d 3 0.97 ± 0.06 1.36 ± 0.2 1.4 *
2 Erdr1 UN 1.13 ± 0.14 1.59 ± 0.07 1.41 *
2 Grid2ip 5 0.84 ± 0.08 1.19 ± 0.1 1.41 *
2 Taf1d 9 1.09 ± 0.17 1.56 ± 0.1 1.43 **
2 Ccl28 UN 0.81 ± 0.19 1.16 ± 0.1 1.44 *
2 Plekhf1 7 1.39 ± 0.25 2.05 ± 0.32 1.47 **
2 Meg3 12 0.85 ± 0.17 1.25 ± 0.15 1.48 *
2 3110052M02Rik 17 1.05 ± 0.16 1.59 ± 0.04 1.52 **

Groups of genes downregulated (1) or upregulated (2) for which the statistical test is <0.05 are listed. Chr, chromosome; FC, fold change. The posthoc statistical test used is a bilateral t-test. ***P < 0.001; **P < 0.01; *P < 0.05.