Table 3.
Distribution of Genotypes for the Hormad1 and Hormad2 variants in the cases and controls. Fisher exact test was used when the number of genotype were ≤5. For others, chi-squared test was used. No significant difference was found in the comparisons (P > 0.05)
| Gene/SNPs | Genotype | Cases | Controls | OR [95%CI] | P |
|---|---|---|---|---|---|
| Hormad1 | |||||
| rs1336900 | GG | 150(0.419) | 161(0.445) | 1 | |
| AG | 153(0.427) | 162(0.448) | 1.014[0.741–1.387] | 0.936 | |
| AA | 55(0.154) | 39(0.108) | 1.514[0.949–2.414] | 0.099 | |
| AG + AA | 203(0.581) | 201(0.555) | 1.084[0.806–1.457] | 0.593 | |
| rs16840074 | TT | 222(0.620) | 219(0.607) | 1 | |
| CT | 121(0.338) | 120(0.332) | 0.995[0.727–1.362] | 0.974 | |
| CC | 15(0.042) | 22(0.061) | 0.673[0.340–1.331] | 0.305 | |
| CT + TT | 136(0.380) | 142(0.393) | 0.945[0.700–1.276] | 0.759 | |
| rs6694531 | CC | 117(0.329) | 112(0.308) | 1 | |
| AC | 179(0.503) | 186(0.511) | 0.921[0.662–1.282] | 0.673 | |
| AA | 60(0.169) | 66(0.181) | 0.870[0.563–1.345] | 0.580 | |
| AC + AA | 239(0.671) | 252(0.692) | 0.908[0.663–1.242] | 0.576 | |
| Hormad2 | |||||
| rs8135823 | TT | 301(0.836) | 303(0.830) | 1 | |
| TG | 56(0.156) | 58(0.159) | 0.972[0.651–1.450] | 0.919 | |
| GG | 3(0.008) | 4(0.011) | 0.755[0.168–3.402] | 1 | |
| TG + GG | 59(0.164) | 62(0.170) | 0.958[0.648–1.416] | 0.843 | |
| rs11090601 | AA | 277(0.772) | 282(0.773) | 1 | |
| AC | 77(0.214) | 79(0.216) | 0.992[0.696–1.415] | 1 | |
| CC | 5(0.014) | 4(0.011) | 1.273[0.338–4.789] | 0.750 | |
| AC + CC | 82(0.228) | 83(0.227) | 1.006[0.711–1.423] | 1 | |
| rs4823073 | GG | 174(0.482) | 166(0.455) | 1 | |
| AG | 146(0.404) | 169(0.463) | 0.824[0.606–1.120] | 0.241 | |
| AA | 41(0.114) | 30(0.082) | 1.304[0.778–2.186] | 0.361 | |
| AG + AA | 187(0.518) | 189(0.545) | 0.944[0.704–1.266] | 0.709 | |
| rs718772 | AA | 286(0.794) | 280(0.767) | 1 | |
| AG | 67(0.186) | 81(0.222) | 0.810[0.563–1.164] | 0.269 | |
| GG | 7(0.019) | 4(0.011) | 1.713[0.496–5.917] | 0.545 | |
| AG + GG | 74(0.216) | 85(0.233) | 0.887[0.625–1.258] | 0.533 | |
| rs9620953 | CC | 300(0.836) | 302(0.827) | 1 | |
| CT | 56(0.156) | 59(0.162) | 0.955[0.641–1.424] | 0.839 | |
| TT | 3(0.008) | 4(0.011) | 0.755[0.168–3.402] | 1 | |
| CT + TT | 59(0.164) | 63(0.173) | 0.943[0.639–1.392] | 0.843 | |
| rs9625930 | GG | 289(0.823) | 304(0.840) | 1 | |
| AG | 61(0.174) | 56(0.155) | 1.146[0.770–1.704] | 0.544 | |
| AA | 1(0.003) | 2(0.006) | 0.526[0.047–5.832] | 1 | |
| AA + AG | 62(0.177) | 58(0.161) | 1.124[0.759–1.392] | 0.843 | |
| rs975704 | GG | 288(0.798) | 292(0.800) | 1 | |
| AG | 65(0.180) | 67(0.184) | 0.984[0.674–1.436] | 1 | |
| AA | 8(0.022) | 6(0.016) | 1.352[0.463–3.945] | 0.602 | |
| AG + AA | 73(0.202) | 73(0.200) | 1.014[0.705–1.458] | 1 | |