Table I.
Recombinase | Origin | Classification | Target site | Target sequence |
---|---|---|---|---|
Flp | S. cerevisiae | Tyrosine | FRT | 5′-GAAGTTCCTATTCTCTAGAAAGTATAGGAACTTC-3′ |
KD | K. drosophilarum | Tyrosine | KDRT | 5′-AAACGATATCAGACATTTGTCTGATAATGCTTCATTATCAGACAAATGTCTGATATCGTTT-3′ |
B2 | Z. bailii | Tyrosine | B2RT | 5′-GAGTTTCATTAAGGAATAACTAATTCCCTAATGAAACTC-3′ |
B3 | Z. bisporus | Tyrosine | B3RT | 5′-GGTTGCTTAAGAATAAGTAATTCTTAAGCAACC-3′ |
R | Z. rouxii | Tyrosine | RSRT | 5′-TTGATGAAAGAATAACGTATTCTTTCATCAA-3′ |
Cre | Phage P1 | Tyrosine | loxP | 5′-ATAACTTCGTATAGCATACATTATACGAAGTTAT-3′ |
VCre | Vibriosp. | Tyrosine | VloxP | 5′-TCAATTTCTGAGAACTGTCATTCTCGGAAATTGA-3′ |
SCre | Shewanellasp. | Tyrosine | SloxP | 5′-CTCGTGTCCGATAACTGTAATTATCGGACATGAT-3′ |
Vika | V. coralliilyticus | Tyrosine | vox | 5′-AATAGGTCTGAGAACGCCCATTCTCAGACGTATT-3′ |
Dre | Bacteriophage D6 | Tyrosine | rox | 5′-TAACTTTAAATAATGCCAATTATTTAAAGTTA-3′ |
λ-Int | Phage λ | Tyrosine | attP | 5′-CAGCTTTTTTATACTAAGTTG-3′ |
attB | 5′-CTGCTTTTTTATACTAACTTG-3′ | |||
HK022 | Phage HK022 | Tyrosine | attP | 5′-ATCCTTTAGGTGAATAAGTTG-3′ |
attB | 5′-GCACTTTAGGTGAAAAAGGTT-3′ | |||
φC31 | Phage φC31 | Serine | attP | 5′-CCCCAACTGGGGTAACCTTTGAGTTCTCTCAGTTGGGG-3′ |
attB | 5′-GTGCCAGGGCGTGCCCTTGGGCTCCCCGGGCGCG-3′ | |||
Bxb1 | Phage Bxb1 | Serine | attP | 5′-GGTTTGTCTGGTCAACCACCGCGGTCTCAGTGGTGTACGGTACAAACC-3′ |
attB | 5′-GGCTTGTCGACGACGGCGGTCTCCGTCGTCAGGATCAT-3′ | |||
Gin | Phage Mu | Serine | gix | 5′-TTATCCAAAACCTCGGTTTACAGGAA-3′ |
Tn3 | E. coli | Serine | res site I | 5′-CGTTCGAAATATTATAAATTATCAGACA-3′ |
For the prototypical site-specific recombinases Cre, Flp, λ-Int, φC31, Gin and Tn3, crossover regions are underlined.