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Sequence alignment and variant detection methods
| Alignment and assembly | Sequence variant detection | |
|---|---|---|
| Method 1 |
Bowtie |
Maq |
| Method 2 |
MOSAIK |
GigaBayes |
| Method 3 | CLC Bio Genomics Workbench (CLC Bio Inc.) | CLC Bio Genomics Workbench |
(CLC Bio Inc., Cambridge, MA, USA).
