. Author manuscript; available in PMC: 2014 Jul 15.

Published in final edited form as: Cell Stem Cell. 2013 Aug 8;13(4):403–418. doi: 10.1016/j.stem.2013.07.002

Table 2. Sequence of primers used for the qPCR in the ChIP analysis.

gene	position in the promoter (kb)	Sequence (5′⋙3′) (forward primer black and reverse green)	gene	position in the promoter (kb)	Sequence (5′⋙3′) (forward primer black and reverse green)
*Sox11*	-10	AGAATTTCTTAGCATGGGAGAGT	*Pou3f4*	-10	TTTTGCCAATGTATGTTTTCCACAG
	-10	GAGAACTGCTTGTACAACATACTGA		-10	GGAGCAAAGAACTTCATTTCAGGC
	-9	AAGAGAGGGAGAGGGAAGGA		-9	TAGTCATTTCAAAGCAGTTTGCAGA
	-9	CGGGACTTAGTTTGGTGCTC		-9	TGCTAGCATTTGAAGGTCACTGTTG
	-8	GAACTCACACCTGAGATCATCCT		-8	CTGGGAAATTTACAAATAGGCTTGG
	-8	GGCCTCTTCTTGCTCTTTCCT		-8	AAAAATCCCTTCCTCTCTCCCTCT
	-7	ACTATAGAACTGTCCAACACATGGG		-7	AGGCCTAAAGAGGGATACATTGGG
	-7	CACACCATACTCTTGTTTCTGAGTT		-7	GGCTGACTTCTTCATCCTGATGATA
	-6	GAGCCGTCACGAGGACAAGT		-6	AGAAGTGGAAGCACCCAAGATGT
	-6	CCATTTCCTCTTGAGTTGGG		-6	GTCACATGATGAGGAAAACCAAAAG
	-5	CATGGTAGGAGAAGAGCAGACC		-5	ATATTCTAACCATCCTGCCTATGCC
	-5	TGTTTCCGAGGTCACTCCTG		-5	GGAGGGAAAGGAATGTGTAGTAGCA
	-4	CTGAGGTGGTCAGTAAAAGTCTCT		-4	TCTGCAGGAGTCATGATCACTATGG
	-4	ATCCTGAGGACATCCTGGCT		-4	CCCTCCTCACAAAATTGAATGATGT
	-3	GCCCAGACAAATGTGACCATTA		-3	CAGGAGAGGGCGAAGGAAAC
	-3	TCTGCTGTTTTTTGAACTACAGAG		-3	CCTCTCCTCTCCCCTCTTCCTACTT
	-2	TCATCTTCTGAAGCTGTGCAC		-2	GAGAGAGGGAGAGGCAGAGGGAAT
	-2	GCTAGTCTCGAACTCATTTCACC		-2	GGGGAGAAAACCTTGCATCTG
	-1	AACACAAAGAGAAGCGAGTTTCC		-1	CTGCCAAGGAAGCAGGATACAAATG
	-1	AACCCAACGGTACAAACCAA		-1	TTCCATCAGAGGTCTCTCCACTATG
	+1	CCAGGAGTGAGAGAGCGAGA		+1	CCCCGCACCATAGATGTCAA
	+1	AAGTTGCAAAGTCCTTGGCC		+1	CCTGCAAGTAGTCACTTTG GAGAAG
	+2	GCGAGCCTGTACGACGAAGT
	+2	CATGAGGTCGTCTGCATCCT
*Nfib*	-10	ATTTTCAGGGATAAACACACA GATG	*Nfib*	-3	CTGACAAGTGCAGAGGGAA GC
	-10	CCATCTCACTAAAATTGCAGA CAT		-3	TCAGGAAGGCTGACACTCC A
	-9	TTCTCATATTGTGTATTTGGT CTGC		-2	CAGATTCTGGGGAGGGTGA G
	-9	CCTGGCCATAATTTACTGTAC AC		-2	GACAGTCGGGGTTAATCCA A
	-8	TTGTGAACGTTAATGCACTCA C		-1	CAACTCCAGGAGGCCAAGT T
	-8	GCTTTCAAGTGCTCGGACTT		-1	ACATCCTAAGGGGAGAAGC C
	-7	CAACAAATTTCTACACTCAGT CAGC		+1	GGTGACACATTCTCCTCGC T
	-7	AATTGTGCGCGTGGAGTTAG		+1	GCCTGGTTTAGGGGATTTG T
	-6	CAGCTTTCAGGTTGAAGGGG		+2	CTAACCTTGGCACACCCTG G
	-6	CCTGGAGATCTTGTCTGTTC TGTC		+2	ATCTCCTTAGGGGCGGACA G
	-5	TCCGCTTAGTTTTAACATGGT C		+3	GGTAACTTAAGGTATTGCA AAAGTG
	-5	TCCCTGAATGTATCCGAACA		+3	TCATGTAAGACCTGAGGTA CTTCTT
	-4	GTGGGGGAAACTAACCAGTT G
	-4	ACAACACCAAAACCCTCCCC