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. Author manuscript; available in PMC: 2014 Jul 15.
Published in final edited form as: Birth Defects Res A Clin Mol Teratol. 2010 Dec 1;91(1):50–60. doi: 10.1002/bdra.20740

Table 4.

Gene interactions between SNPs in different folate pathway genes

A. NHW
Gene A Marker A Gene B Marker B P-value
BHMT rs567754 TYMS rs495139 0.006
BHMT2 rs476620 BHMT rs585800 0.005
BHMT2 rs2253262 CBS rs2851391 0.010
FOLR1 rs11235462 CBS rs1801181 0.008
FOLR1 rs1540087 CBS rs234783 0.009
FOLR1 rs11235462 MTHFD1 rs2236224 0.008
FOLR1 rs1540087 MTHFS rs2586179 0.0004
FOLR1 rs1540087 SLC19A1 rs4819130 0.007
FOLR2 rs2298444 CBS rs234714 0.001
FOLR2 rs2276048 CBS rs234714 0.007
FOLR2 rs2298444 MTHFS rs2115540 0.007
MTHFD1 rs1256142 CBS rs12329790 0.005
MTHFD1 rs2236224 CBS rs12329790 0.009
MTHFD1 rs34616731 SLC19A1 rs3788205 0.001
MTHFD1 rs1256146 SLC19A1 rs3788205 0.007
MTHFD2 rs7587117 MTHFS rs2586179 0.002
MTHFD2 rs7587117 MTHFS rs2562744 0.002
MTHFD2 rs7571842 MTHFS rs2562744 0.003
MTHFD2 rs7571842 MTHFS rs2586179 0.004
MTHFD2 rs7587117 MTRR rs162029 0.006
MTHFD2 rs828858 MTRR rs162029 0.010
MTHFR rs1889292 SLC19A1 rs1051266 0.003
MTHFR rs1889292 SLC19A1 rs3788205 0.009
MTHFR rs1476413 SLC19A1 rs4819130 0.009
MTHFS rs2586179 TYMS rs2853741 0.007
MTRR rs2303080 MTHFD1 rs34616731 0.002
MTRR rs2303080 MTHFD1 rs1256146 0.009
NOS3 rs1800779 CBS rs1051319 0.003
NOS3 rs1800779 FOLR2 rs2276048 0.007
NOS3 rs2373929 MTHFD1 rs1076991 0.002
NOS3 rs891512 MTHFS rs2586179 0.007
NOS3 rs1800779 MTHFS rs2562744 0.009
B. Hispanic
Gene A Marker A Gene B Marker b p-value
BHMT rs645112 MTHFD1 rs1256146 0.010
BHMT2 rs626105 CBS rs1051319 0.008
BHMT2 rs476620 CBS rs1801181 0.010
BHMT2 rs2253262 MTHFD1 rs2236225 0.009
BHMT2 rs682985 SLC19A1 rs2297291 0.005
BHMT2 rs1422086 SLC19A1 rs2297291 0.009
CBS rs234783 SLC19A1 rs4819130 0.008
CBS rs2851391 SLC19A1 rs3788190 0.009
MTHFD1 rs2236222 SLC19A1 rs2297291 0.002
MTHFD1 rs1885031 SLC19A1 rs2297291 0.008
MTHFD1 rs1076991 TYMS rs502396 0.004
MTHFD1 rs1076991 TYMS rs2853532 0.010
MTHFR rs1889292 BHMT2 rs2253262 0.008
MTHFR rs4846052 CBS rs2851391 0.005
MTHFR rs3737964 CBS rs234784 0.009
MTHFR rs1476413 FOLR1 rs11235462 0.001
MTHFR rs3737964 FOLR1 rs11235462 0.004
MTHFR rs1889292 FOLR2 rs2276048 0.006
MTHFR rs1476413 FOLR2 rs2276048 0.010
MTHFR rs1476413 SLC19A1 rs10483080 0.006
MTHFR rs1801131 SLC19A1 rs10483080 0.009
MTR rs12354209 MTHFD2 rs7587117 0.001
MTR rs1770449 MTHFD2 rs7587117 0.003
MTR rs1266164 MTHFD2 rs7587117 0.004
MTR rs1806505 MTHFD2 rs7587117 0.005
MTR rs1266164 MTHFD2 rs828858 0.005
MTR rs6668344 MTHFD2 rs828858 0.007
MTR rs1770449 MTHFD2 rs828858 0.008
MTR rs4077829 MTHFD2 rs828858 0.009
MTR rs12354209 MTHFD2 rs828858 0.010
MTRR rs162029 CBS rs234783 0.003
NOS3 rs3918211 CBS rs1051319 0.007
NOS3 rs2373929 SLC19A1 rs12483377 0.010
TYMS rs1001761 CBS rs234785 0.008

only p-values ≤ 0.01 shown, NHW = nonHispanic white group