. 2014 Jun 25;12:35. doi: 10.1186/1477-5956-12-35

Table 3.

Distribution of Streptomyces scabiei proteins into functional groups

Class of proteins	Number of proteins
	In CM only	Overproduced in CSM^a	In CSM only
Translational, ribosomal structure and biogenesis	2^b	17^b	23^b
Transcription	2	1^b	3^b
Posttranslational modification, protein turnover, chaperone	11	0	2^b
Cell wall/membrane/envelope biogenesis	14	2	4^b
Signal transduction mechanisms	3^b	0	1^b
Secretion	3	0	0
Defense mechanism and virulence	3	2	5^b
Secondary metabolites biosynthesis, transport and catabolism	0	0	4
Differentiation	1	1	0
Energy production and conversion	4	4^b	2^b
Lipid metabolism	1	3	8^b
Degradation of aromatic compounds	0	0	1
Carbohydrate metabolism	5	45	36
Amino acid metabolism	14	13	11^b
Coenzyme metabolism	1^b	0	5
Nucleotide metabolism	1^b	1	4^b
Inorganic ion metabolism	3	1	2
General function prediction only	9	3	18
Unknown function	47	8	10

^aProtein with a spectral counting/MW 5-fold greater in CSM than in CM; ^bMost or all proteins have a predicted intracellular localisation.