Table 6.
Effect of suberin on Streptomyces scabiei gene expression
|
Gene assignation |
Protein assignation |
Putative function |
Relative gene expression
a
|
|||
|---|---|---|---|---|---|---|
| Day 2 | Day 3 | Day 4 | Day 5 | |||
| SCAB_3891 |
C9YSS1 |
α-galactosidase |
7.3 ± 3.5b |
6.3 ± 3.2b |
3.4 ± 1.0b |
3.4 ± 1.1b |
| SCAB_6001 |
C9YVP7 |
Feruloyl esterase |
29.6 ± 14.8b |
74.0 ± 24.0b |
78.0 ± 23.6b |
159.3 ± 14.3b |
| SCAB_51091 |
C9YTK3 |
Esterase-lipase |
1.8 ± 0.6b |
1.9 ± 0.5b |
0.8 ± 0.1 |
1.5 ± 0.4 |
| SCAB_57301 |
C9Z2P6 |
3-oxo-5.6-dehydrosuberyl-CoA semialdehyde dehydrogenase |
1.7 ± 0.6b |
2.3 ± 1.2 |
1.2 ± 0.6 |
1.0 ± 0.3 |
| SCAB_70541 |
C9YYE5 |
Lipolytic enzyme |
3.6 ± 1.3b |
9.4 ± 4.1b |
6.5 ± 0.9b |
12.9 ± 1.3b |
| SCAB_74351 |
C9Z5Z2 |
Glycerophosphoryl diester phosphodiesterase |
2.0 ± 0.5b |
3.6 ± 0.9b |
1.2 ± 0.5 |
1.2 ± 0.1 |
| SCAB_78851 |
C9ZCR0 |
Sphingolipid ceramide N-deacylase |
1.2 ± 0.4 |
4.6 ± 1.7b |
1.8 ± 0.2b |
1.3 ± 0.3 |
| SCAB_79261 | C9ZE96 | Feruloyl esterase | 298.3 ± 184.3b | 298.6 ± 81.0b | 301.0 ± 73.6b | 342.0 ± 46.3b |
aData are the mean of four replicates; bGene expression was significantly different between growth conditions.