Table 2. Sample Concepts in the Backbone Ontology.
Concept Name | Created by ourselves? | Imported from | Properties Extended? | Relationships Extended? |
miRNA | No | SO | Yes | Yes |
chromoplast_gene | No | SO | No | No |
gene_expression | No | GO | No | Yes |
biological_process | No | GO | No | Yes |
protein | No | PRO | Yes | Yes |
amino_acid_chain | No | PRO | No | Yes |
Tumor | No | HDO | Yes | Yes |
Organ | No | FMA | Yes | Yes |
object | No | BFO | No | Yes |
material_entity | No | BFO | No | Yes |
independent_continuant | No | BFO | No | Yes |
continuant | No | BFO | No | Yes |
entity | No | BFO | No | Yes |
MiRNABinding | Yes | N/A | N/A | N/A |
ExperimentalValidation | Yes | N/A | N/A | N/A |
PharmaceuticalTreatment | Yes | N/A | N/A | N/A |
AdvantageousRegulation | Yes | N/A | N/A | N/A |
OncoGeneratingMiRNA | Yes | N/A | N/A | N/A |
TumorSuppressingMiRNA | Yes | N/A | N/A | N/A |
OtherMiRNA | Yes | N/A | N/A | N/A |