Table 2.
Grapevine homologs to Arabidopsis UV-B signalling pathway proteins
| Protein | ID | Length (aa) | Query coverage (%) | Identity (%) | 23 ºBrix (FUV+/FUV-) a | 26 ºBrix (FUV+/FUV-) a | P b |
|---|---|---|---|---|---|---|---|
|
UVR8 (AT5G63860, 440 aa) | |||||||
| VvUVR8 |
VIT_07s0031g02560 |
445 |
98 |
82 |
0.03 |
0.07 |
- |
|
HY5 (AT5G11260, 168 aa) | |||||||
| VvHY5-1 |
VIT_04s0008g05210 |
169 |
100 |
78 |
0.53 |
0.58 |
0.022 |
| VvHY5-2 |
VIT_05s0020g01090 |
210 |
67 |
48 |
0.99 |
0.47 |
0.002 |
|
COP1 (AT2G32950, 675 aa) | |||||||
| VvCOP1-1 |
VIT_12s0059g01420 |
676 |
100 |
75 |
0.25 |
-0.26 |
- |
| VvCOP1-2 |
VIT_10s0523g00030 |
602 |
89 |
78 |
0.25 |
-0.07 |
- |
|
RUP1 (AT5G52250, 385 aa) | |||||||
| VvRUP |
VIT_16s0050g00020 |
770 |
94 |
60 |
1.49 |
1.36 |
0.004 |
|
RUP2 (AT5G23730, 368 aa) | |||||||
| VvRUP | VIT_16s0050g00020 | 770 | 98 | 64 | 1.49 | 1.36 | 0.004 |
Arabidopsis protein name abbreviations are highlighted in bold.
aLog2 of normalized expression ratio in the NimbleGen microarrays. bDifferential expression significance P <0.05 for UV factor in ANOVA.