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. 2014 Jul 15;9(7):e102483. doi: 10.1371/journal.pone.0102483

Table 2. Summary of the interaction algorithm parameters.

Parameter Setting
Architecture N-2-1, where N = total number of genes −1
Learning algorithm Backpropagation
Activation function Sigmoid
Epochs 300
Threshold of mean squared error (MSE) 0.01
Window of MSE 100
Momentum 0.5
Learning rate 0.1
Pearson r cutoff 0.7
Cross-validation Monte Carlo cross-validation
Random reshuffle 50 times
Ratio (%) for training: testing: validation 60∶20∶20
Number of time the whole process repeatfor single variable 10