Table 4.

Orthologs and paralogs for Arabidopsis and Catharanthus WRKY found using OrthoMCL

Catharanthus roseus	Arabidopsis thaliana	Other
CrWRKY1, CrWRKY48, CrWRKY52	AtWRKY54, AtWRKY70
CrWRKY2, CrWRKY3, CrWRKY4, CrWRKY5, CrWRKY8, CrWRKY51	AtWRKY20, AtWRKY33	CmWRKY1
CrWRKY6	AtWRKY44
CrWRKY7	AtWRKY2
CrWRKY9, CrWRKY12	AtWRKY1
CrWRKY10	AtWRKY32
CrWRKY13, CrWRKY14, CrWRKY15	AtWRKY40	GaWRKY1
CrWRKY16, CrWRKY20	AtWRKY6, AtWRKY31, AtWRKY42	TcWRKY1
CrWRKY17, CrWRKY18	AtWRKY72
CrWRKY19	AtWRKY9
CrWRKY21, CrWRKY22, CrWRKY26, CrWRKY27, CrWRKY29, CrWRKY33	AtWRKY8, AtWRKY12, AtWRKY23, AtWRKY28, AtWRKY48, AtWRKY51, AtWRKY57, AtWRKY71	HbWRKY1
CrWRKY23, CrWRKY32	AtWRKY50
CrWRKY24	AtWRKY13
CrWRKY25	AtWRKY49
CrWRKY28	AtWRKY75	CjWRKY1
CrWRKY30, CrWRKY31	AtWRKY24, AtWRKY43, AtWRKY56
CrWRKY34, CrWRKY35	AtWRKY7	PqWRKY1
CrWRKY36	AtWRKY21
CrWRKY37	AtWRKY11, AtWRKY17
CrWRKY38	AtWRKY69
CrWRKY39	AtWRKY65
CrWRKY41, CrWRKY43	AtWRKY22, AtWRKY27
CrWRKY42	AtWRKY14, AtWRKY35
CrWRKY45, CrWRKY46, CrWRKY47	AtWRKY41, AtWRKY46, AtWRKY53	AaWRKY1

WRKYs in ‘bold font’ are jasmonate responsive, either according to the literature or by our findings in this study. WRKY highlighted in italics are TFs known to regulate secondary metabolism in A. thaliana, Artemisia annua, C. rosues, Coptis japonica, Gossypium arboreum, Hevea brasiliensis, Panax quinquefolius, and Taxus chinensis.