Table 1. Summary of Acidovorax avenae subsp. avenae strain RS-1 cDNA samples sequenced using the Illumina genome analyze.

Sample name	In vitro (1)	In vitro (2)	In vivo (1)	In vivo (2)	Co-culture (1)	Co-culture (2)
Number of reads	21,439,332	14,620,058	28,261,598	31,932,210	27,392,918	28,330,180
Mapped reads	20,062,237	13,360,933	16,328,205	18,776,074	26,011,042	26,310,263
Unique mapped	1,552,759	1,983,472	1,267,326	1,246,124	2,080,783	3,546,162
mRNA percent	7.2%	13.6%	4.5%	3.9%	7.6%	12.5%