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. 2014 Jul 16;2:46. doi: 10.3389/fchem.2014.00046

Table 3.

Steady state kinetic parameters for selected pNBE variants of the DE library.

Substrate Benzoylthiocholinea Butyrylthiocholineb
Enzyme kcat (1/min) Km (mM) kcat/Km(1/min*mM) kcat (1/min) Km (mM) kcat/Km(1/min*mM)
WT 70 ± 9 1.2 ± 0.3 58 ± 16 130 ± 10 5.4 ± 0.8 24 ± 4
A107H 13 ± 1 0.6 ± 0.2 22 ± 7 35 ± 8 17 ± 5 2.0 ± 0.9
A107H Ω Loop 8 ± 1 0.9 ± 0.3 9 ± 3 10.4 ± 0.9 8.0 ± 0.7 1.3 ± 0.2
A107K 570 ± 50 1.4 ± 0.2 410 ± 70 >20 >8c
A107Q 40 ± 4 1.0 ± 0.2 39 ± 9 40 ± 10 19 ± 7 2 ± 1
A107R 90 ± 20 5 ± 1 20 ± 6 >50 >8c
A107S 39 ± 9 1.4 ± 0.6 30 ± 10 780 ± 30 14.4 ± 0.7 54 ± 3
A107T 36 ± 3 0.6 ± 0.2 60 ± 20 240 ± 30 11 ± 2 22 ± 5
A107V 38 ± 4 0.5 ± 0.2 80 ± 30 56 ± 8 8 ± 2 7 ± 2
A107Y 21 ± 2 0.6 ± 0.1 35 ± 8 45 ± 5 6.0 ± 0.9 7 ± 1
A107H/A190G 29 ± 4 0.9 ± 0.3 30 ± 10 50 ± 30 11 ± 7 5 ± 4
A107H/A190R 12 ± 1 0.6 ± 0.2 20 ± 7 200 ± 30 13 ± 2 15 ± 3
A107S/A190G 23 ± 4 2.2 ± 0.6 10 ± 3 90 ± 30 11 ± 4 9 ± 4
A107V/A190G 21 ± 2 0.6 ± 0.1 35 ± 7 45 ± 5 6.0 ± 0.9 8 ± 1
A107H/A400D 80 ± 10 2.1 ± 0.6 40 ± 10 190 ± 60 11 ± 5 18 ± 9
A107H/A190S/A400S 6.4 ± 0.9 0.8 ± 0.2 9 ± 3 115 ± 14 9 ± 1 13 ± 3

Benzoylthiocholine and butyrylthiocholine were used as substrates. Specific activities of the other variants are shown graphically in the Supplemental Information.

a

Benzoylthiocholine has limited solubility in DMSO, the highest substrate concentration tested was 2.5 mM.

b

Butyrylthiocholine was also a poor substrate of pNBE, and Km values were in the mid-millimolar range. Saturation was not achieved at the highest substrate concentration tested (8 mM). Km values were extrapolated from double reciprocal plots.

c

Saturation was not achieved at [S] = 8 mM, and the plot of velocity vs. [S] was linear. Extrapolated Km's exceeded 40 mM.