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The impact of different RBSs on the GPU performance.
| RBS | 1 GPU | 2 GPUs | 4 GPUs | miRanda on CPU | 4GPUs vs. CPU | |||
|---|---|---|---|---|---|---|---|---|
| Time | GCUPs | Time | GCUPs | Time | GCUPs | Time | Speedup | |
| 8 | 19.56 | 1.77 | 10.74 | 3.23 | 6.56 | 5.28 | 1076 | 164x |
| 16 | 19.25 | 1.8 | 10.57 | 3.28 | 6.48 | 5.35 | 166x | |
| 32 | 19.25 | 1.8 | 10.49 | 3.3 | 6.47 | 5.36 | 166x | |
Both reference and query datasets have 256 sequences and the execution time was measured in seconds.
