Table 1.
Identification of the PAL gene family from the Phytozome database in this study
| Species | PAL seq ID |
|---|---|
|
Bryophyta | |
| Physcomitrella patens (10) |
Pp1s22_3V6.1 Pp1s32_311V6.1 Pp1s36_253V6.1 Pp1s5_197V6.1 Pp1s20_305V6.1 Pp1s494_3V6.1 Pp1s500_4V6.1 Pp1s43_88V6.1 Pp1s43_67V6.1 Pp1s52_44V6.1 |
|
Gymnosperm | |
| Pinus taeda (5) |
Pteda1143311 Pteda17307 Pteda9006 Pteda28316 Pteda34319 |
|
Monocotyledons | |
| Brachypodium distachyon(6) |
Bradi5g15830.1 Bradi3g48840.1 Bradi3g47120.1 Bradi3g49260.1 Bradi3g49270.1 Bradi3g49250.2 |
| Oryza sativa (9) |
Os02g41630.2 Os02g41650.1 Os02g41670.1 Os02g41680.1 Os04g43760.1 Os04g43800.1 Os05g35290.1 Os11g48110.1 Os12g33610.1 |
| Sorghum bicolor(6) |
Sb04g026520.1 Sb04g026560.1 Sb04g026510.1 Sb06g022740.1 Sb06g022750.1 Sb01g014020.1 |
| Setaria italica (6) |
Si016478m Si016504m Si016467m Si009345m Si009509m Si012256m |
| Zea mays (11) |
GRMZM2G441347_T01 GRMZM2G118345_T01 GRMZM2G447436_T01 GRMZM2G063917_T01 GRMZM2G160541_T01 GRMZM2G081582_T01 GRMZM2G326335_T01 GRMZM2G334660_T01 GRMZM2G170692_T01 GRMZM2G074604_T01 GRMZM2G029048_T01 |
|
Dicotyledons | |
| Nelumbo nucifera (3) |
NnPAL1 NnPAL2 NnPAL3 |
| Aquilegia coerulea (2) |
Aquca_030_00132.1 Aquca_087_00007.1 |
| Arabidopsis thaliana (4) |
AT2G37040.1(AtPAL1) AT3G53260.1 (AtPAL2) AT5G04230.2 (AtPAL3) AT3G10340.1 (AtPAL4) |
| Cucumis sativus (8) |
Cucsa.124460.1 Cucsa.124480.1 Cucsa.124470.1 Cucsa.124500.1 Cucsa.124490.1 Cucsa.385970.1 Cucsa.124510.1 Cucsa.137590.1 |
| Glycine max (5) |
Glyma13g20800.1 Glyma03g33880.1 Glyma02g47940.1 Glyma20g32135.1 Glyma10g35381.1 |
| Mimulus guttatus (3) |
mgv1a001582m mgv1a019971m mgv1a002104m |
| Populus trichocarpa (4) |
Potri.010G224200.1 Potri.010G224100.1 Potri.006G126800.1 Potri.008G038200.1 |
| Vitis vinifera (10) | GSVIVT01024306001 GSVIVT01016257001 GSVIVT01024292001 GSVIVT01025214001 GSVIVT01024294001 GSVIVT01024305001 GSVIVT01024315001 GSVIVT01025703001 GSVIVT01024295001 GSVIVT01024293001 |
Note: The PAL gene family identified from one Bryophyta (Physcomitrella patens), one gymnosperm (Pinus taeda), five monocotyledons (Brachypodium distachyon, Oryza sativa, Sorghum bicolor, Setaria italica, Zea mays) and eight dicotyledons (Nelumbo nucifera, Aquilegia caerulea, Arabidopsis thaliana, Cucumis sativus, Glycine max, Mimulus guttatus, Populus trichocarpa, Vitis vinifera).