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. Author manuscript; available in PMC: 2015 Apr 1.
Published in final edited form as: Cancer Genet. 2014 Mar 18;207(4):133–140. doi: 10.1016/j.cancergen.2014.03.004

Table 1.

Primer sequence

Column1 Primer Sequence 5' to 3'
Surround PATRR3 FHITi3-4F GTTCCCCTTGAAATCACTGC
FHITi3-4R AGGTTACCAAAGTGATCAAACC
Surround PATRR3 FHITi3-5F CACAAGGCTCACCACTAATCG
FHITi3-5R GCCGCTAAAACAATTCTTCC
Surround PATRR8 RNF139i1-1F TTATTTGTCTATCTGATGCCTTCC
RNF139i1-1R CATGGAAGGTAACAAGAAAATGG
Surround PATRR8 RNF139i1-2F TTAGTGGCCCATTTTCTTGG
RNF139i1-2R CAGTAGACGCATTTCACAATCC
PATRR3 PATRR3-386F GCACCCTGAAGGCTACTTGTTAAAG
PATRR3+411R AACTGGGCTGGACCTCTTTTGGAAC
PATRR3 Nested PCR PATRR3 NestFw AACTGGGCTGGACCTCTTTTGGAAC
PATRR3 NestRv GGCGCAAAAAAAARAAAGATATATGATATG
der(3)t(3;8) PATRR3+411R AACTGGGCTGGACCTCTTTTGGAAC
PATRR8+267R CATTTAAGTGATGACTCTGTCCAGGG
der(8)t(3;8) PATRR8-512F GATTACATATGGCATCTGGTAGGCTG
PATRR3-386F GCACCCTGAAGGCTACTTGTTAAAG
der(3)t(3;22) PATRR3+411R AACTGGGCTGGACCTCTTTTGGAAC
JF22 CCTCCAACGGATCCATACT
der(22)t(3;22) JF22 CCTCCAACGGATCCATACT
PATRR3-386F GCACCCTGAAGGCTACTTGTTAAAG
der(3)t(3;11) PATRR3+411R AACTGGGCTGGACCTCTTTTGGAAC
PATRR11-216F GAGAGTAAAGAAATAGTTCAGAAAGG
der(11)t(3;11) PATRR11+212R CCACAGACTCATTCATGGAACC
PATRR3-386F GCACCCTGAAGGCTACTTGTTAAAG