Table 3. auROC and auPRC comparison analysis for Recognition of HSS Sites.
Algorithm | auROC | auPRC |
Feature-based | ||
K-mer | 82.20 | 82.6 |
Gibbs Sampling | 79.3 | 50.3 |
EFFECT | 89.7 | 89.2 |
Statistical-based | ||
PWM-HMM | 70.8 | 47.8 |
BayesNetwork | 72.5 | 49.5 |
HomogenousHMM | 82.02 | 71.5 |
WAM-HMM | 80.05 | 70.0 |
MSP | 85.5 | 72.9 |
Kernel-based | ||
WeightedPosition | 80.01 | 62.3 |
WeightedPositionShift | 80.93 | 64.9 |