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| Algorithm | auROC |
| Feature | |
| K-mer | 94.20 |
| Gibbs Sampling | 95.2 |
| EFFECT | 98.9 |
| Statistical | |
| PWM-HMM | 77.45 |
| BayesNetwork | 86.82 |
| HomogenousHMM | 93.6 |
| WAM-HMM | 94.59 |
| MSP | 93.54 |
| Kernel | |
| WeightedPosition | 96.9 |
| WeightedPositionShift | 97.8 |
