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Comparison of Prodigal and proteomgenomic mapping coordinates
| 5' extensions | |||||
|---|---|---|---|---|---|
| Locus | PGM Start | Prodigal Start | Stop | Direction | RBS Motif* |
| mhp063 | 74166 | 74166 | 76196 | + | AGxAGG/AGGxGG |
| mhp073 | 91023 | 91023 | 92147 | + | GGA/GAG/AGG |
| mhp451 | 555692 | 555692 | 554796 | - | AGGAG |
| Intergenic mappings | |||||
| Gene | PGM Start | Prodigal Start | Stop | Direction | RBS Motif* |
| gatC | 34617 | 34617 | 34910 | + | GGxGG |
| rpmF | 120237 | 120237 | 120040 | - | AGGA |
*An "x" in the motif indicates a mismatch is allowed.
