Table 1. Patient information for the nine genotype 3 isolates and the variable number of nucleotides/amino acids in certain genomic regions.
ID | Subtype | Origin | Full | ORF | 5′ UTR | E2 | NS5A | 3′ UTR |
H77 | 1a | USA | 9646 | 9036/3011 | 341 | 1089/363 | 1344/448 | 269 |
NE274 | 3d | Nepal | 9458 | 9066/3021 | 339 | 1104/368 | 1359/453 | 53 |
NE145 | 3e | Nepal | 9458 | 9066/3021 | 340 | 1107/369 | 1356/452 | 52 |
811 | 3h | Somalia | 9633 | 9060/3019 | 339 | 1104/368 | 1353/451 | 234 |
QC07 | 3a | Canada | 9462 | 9066/3021 | 339 | 1107/369 | 1356/452 | 57 |
QC08 | 3a | Canada | 9458 | 9066/3021 | 339 | 1107/369 | 1356/452 | 53 |
QC09 | 3a | Canada | 9465 | 9066/3021 | 339 | 1107/369 | 1356/452 | 60 |
QC10 | 3a | Canada | 9464 | 9069/3022 | 339 | 1110/370 | 1356/452 | 56 |
QC34 | 3b | Canada | 9458 | 9066/3021 | 339 | 1107/369 | 1356/452 | 53 |
QC88 | 3b | Canada | 9463 | 9069/3022 | 339 | 1110/370 | 1356/452 | 55 |
The genotype 1 sequence H77 (GenBank accession number AF009606) is included for comparison.