Fig. 4.

Phasing of a single gene. (A) Histogram of alignment qualities for all CSMMs to MRPL10 gene. (B) Alignments of CSMMs to the MRPL10 gene with heterozygous mismatches that differ from hg19 highlighted. (C) Bar chart of all cumulative eigenvalues. (D) Scatterplot of reads in the space defined by eigenvector 1 and eigenvector 2 for reads from the GM12878 cell line. Color scale from white (absence of reads) to red (strong enrichment of reads). (E) Same plot as in D but for reads from the cell line GM12892. (F) Same plot as in D but for reads from the cell line GM12891.