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. 2014 May 23;29(2):154–161. doi: 10.1264/jsme2.ME14002

Table 2.

Phylogenetic identification of the lipolytic bacteria isolated from original soil (NS) and oil-enriched soil (OS)

Phylogeny assigned No. of strains isolated 16S rRNA gene sequence comparison

Species as closest relatives Accession no. Identity (%)
NS (non-enriched soil)
 Phylum Firmicutes
  Bacillus 4 Bacillus simplex DSM 1321 NR_042136 99.6–100
2 Bacillus megaterium NBRC 13498 AB680420 99.7–100
1 Bacillus thuringiensis serovar kurstaki HD73 CP004069 99.9
  Lysinibacillus 4 Lysinibacillus sphaericus 205y AF435435 99.7–100
 Phylum Proteobacteria
  Class Betaproteobacteria
   Burkholderia 1 Burkholderia phytofirmans PsJN CP001052 99.1
  Class Gammaproteobacteria
   Pseudomonas 1 Pseudomonas arsenicoxydans MaBP1 JQ317810 99.3
1 Pseudomonas putida ATCC 17472 AF094738 99.6
1 Pseudomonas putida NBRC 102093 AB681704 98.7
1 Pseudomonas vancouverensis DhA-51 AJ011507 99.7
 Phylum Actinobacteria
  Rhodococcus 1 Rhodococcus erythropolis CR-53 AJ786263 99.4

OS (Oil-enriched soil)
 Phylum Firmicutes
  Bacillus 2 Bacillus thuringiensis serovar kurstaki HD73 CP004069 99.5–99.8
1 Bacillus simplex DSM 1321 NR_042136 100
 Phylum Proteobacteria
  Class Betaproteobacteria
   Burkholderia 10 Burkholderia caledonica LMG 19076 HQ849076 97.9–99.8
1 Burkholderia hospita LMG 20598 HQ849087 99.1
1 Burkholderia glathei N15 NR_037065 97.9
   Mitsuaria 1 Mitsuaria chitosanitabida NBRC 102408 AB681764 98.8
 Phylum Actinobacteria
  Curtobacterium 1 Curtobacterium herbarum DSM 14013 AM410692 96.0