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. 2012 Oct 5;27(4):430–442. doi: 10.1264/jsme2.ME12029

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Copyright © 2012 by the Japanese Society of Microbial Ecology / the Japanese Society of Soil Microbiology

This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Fig. 2 — Central metabolic pathways of R. litoralis OCh149 in the stationary phase. Enzymes identified using LC-MS/MS are highlighted. Abbreviations (metabolites): GLC, glucose; FRU, fructose; F-6-P, fructose-6P; F-1,6-P, fructose-1,6P; GAP, glyceraldehyde-3P; 1,3-PG, glycerate-1,3P; 3-PG, glycerate-3P; 2-PG, glycerate-2P; PEP, phosphoenol-pyruvate; PYR, pyruvate; OAA, oxaloacetate; CIT, citrate; CACT, cis-aconitate; ICI, isocitrate; OASUC, oxalosuccinate; AKG, 2-oxo-glutarate; 3-C-1-HThPP, 3-carboxy-1-hydroxypropyl-ThPP; SUCCDHL, S-succinyldihydrolipoamide-E; SUCOA, succinyl-CoA; SUC, succinate; FUM, fumarate; MAL, malate; G-6-P, glucose-6P; 6-PGL, 6-phosphogluconolactone; 6-PGT, 6-phosphogluconate; KDPG, 2-dehydro-3-deoxygluconate-6P; E-4-P, erythrose-4P; XU-5-P, xylulose-5P; S-7-P, sedoheptulose-7P; R-5-P, ribose-5P; GLU, glutamate; GLN, glutamine; GAM-6-P, glucosamine-6P; Ala-L, L-alanine; Ala-D, D-alanine; Asp, asparatate; ARGSUC, arginino-succinate; ASUC, adenylo-succinate; 3-P-HPYR, 3P-hydroxy-pyruvate; P-SER, phosphoserine; SER, serine; O-Ac-SER, O-acetyl-serine; CYS, cysteine; TRP, L-tryptophan; ALAC-S, (s)-2-acetolactate; 23DHMB, (R)-2,3-dihydroxy-3-methylbutanoate; ILEU, isoleusine; VAL, valine; HTHPP, 2-hydroxyethyl-ThPP; ACDDL, S-acetyl-dihydrolipoamide-E; AC-CoA, acetyl-CoA; ACAc-CoA, acetoacetyl-CoA; M-CoA, malonyl-CoA; M-[ACP], malonyl-[acp]; ACAc-[ACP], acetoacetyl-[acp]; AC, acetate. Abbreviations (enzymes): XylA, xylose isomerase; Pgi, glucose-6-phosphate isomerase; Zwf, glucose-6-phosphate-1-dehydrogenase; Fba, fructose-bisphosphate aldolase; Gap, glyceraldehyde-3-phosphate dehydrogenase; Eno, enolase; Pyk, pyruvate kinase; Pyc, pyruvate carboxylase; Edd, phosphogluconate dehydratase; Tkt, transketolase; Prs, ribose-phosphate pyrophosphokinase putative; GltA, citrate synthase; Acn, aconitate hydratase; Icd, isocitrate dehydrogenase (NADP-dependent); SucA, alpha-ketoglutarate dehydrogenase; SucC, succinyl-CoA synthetase, beta subunit; SucD, succinyl-CoA synthetase, alpha subunit; SdhA, succinatedehydrogenase flavoprotein subunit; FumC, fumarate hydratase; Mdh, malate dehydrogenase; Ald, alanine dehydrogenase; Dat, D-alanine aminotransferase; AspC, aspartate aminotransferase; Adss, adenylosuccinate synthetase; ArgG, argininosuccinate synthase; CysE, serine acetyltransferase; CysK, O-acetylserine sulfhydrylase; TrpA, tryptophan synthase, alpha subunit; TrpB, tryptophan synthase, beta subunit; IlvC, ketol-acidreductoisomerase; IlvD, dihydroxy-acid dehydratase; IlvE, branched-chain amino acid aminotransferase; Glud, glutamate dehydrogenase; GlnA, glutamine synthetase, type I; GlmS, D-fructose-6-phosphate amidotransferase; PdhA, pyruvate dehydrogenase complex, E1 component, alpha subunit; AceF, dihydrolipoamide acetyltransferase; PhaA, acetyl-CoA acetyltransferase; PhaB, acetoacetyl-CoA reductase; PhaR, polyhydroxyalkanoate synthesis repressor; FabA, 3-hydroxydecanoyl-ACP dehydratase; FabB, 3-oxoacyl-(acyl-carrier-protein) synthase; Acs, acetyl-coenzyme A synthetase. Detailed information about the proteins is provided in supplemental material Table S1.