Table 3.

T-cell activation gene regulatory network: variable selection results from the adaptive group LASSO. For a particular gene listed in Columns 1 and 4, Columns 2 and 5 provide the list of genes that have a significant regulation effects (inward inuence) on this gene, and Columns 3 and 6 provide the list of genes that this particular gene has a significant regulation effect on (outward inuence).

Gene	Inward Inuence Genes	Outward Inuence Genes	Gen	Inward Inuence Genes	Outward Inuence Genes
1	29, 32, 43		30	6, 46, 52
2	32, 41, 45		31	25	6, 10, 23, 27, 35, 46, 48
3	29, 35, 41		32	48	1, 2, 5, 21, 24, 26, 56, 57
4	25		33	27, 28, 41	11, 23
5	32, 35		34	6, 27
6	6, 25, 31	6, 9, 16, 26, 30, 34, 42, 52	35	20, 31	3, 5, 9, 14, 18, 20, 21, 38
7	45, 52, 57	11, 23	36	37	23
8	25		37	25	12, 13, 16, 22, 27, 36, 40, 56
9	6, 17, 27, 28, 35, 45		38	11, 28, 29, 35
10	31, 51, 52		39	25	53
11	7, 13, 33, 46, 57	14, 18, 21, 38	40	37, 46
12	29, 37		41	20, 55	2, 3, 15, 17, 25, 33, 42, 50, 58
13	37	11, 14, 15, 23, 50	42	6, 41, 46
14	11, 13, 20, 28, 29, 35		43	27	1
15	13, 41, 45		44	28, 29, 45, 57
16	6, 27, 37		45	52	2, 7, 9, 15, 18, 44, 46, 49, 55
17	41, 48	9, 54	46	31, 45	11, 23, 24, 30, 40, 42, 58
18	11, 35, 45, 54		47	27
19	25	58	48	31, 48	17, 28, 32, 48
20	29, 35, 55	14, 25, 35, 41, 57	49	35, 45, 52
21	11, 28, 32, 35		50	13, 41, 57
22	27, 37, 52		51	25	10
23	7, 13, 31, 33, 36, 46, 57		52	6	7, 10, 22, 29, 30, 45, 49, 53, 55
24	32, 46, 57		53	39, 52
25	20, 28, 41	4, 6, 8, 19, 26, 31, 37, 39, 51	54	17
26	6, 25, 32		55	27, 45, 52	20, 41
27	31, 37	9, 16, 22, 33, 34, 43, 47, 55, 58	56	32, 37
28	48, 57	9, 14, 21, 25, 33, 38, 44	57	20, 32	7, 11, 23, 24, 28, 44, 50
29	52	1, 3, 12, 14, 20, 38, 44	58	19, 27, 41, 46