Table 3.
Chr. | Most Significant |
A1/ A2 |
Freq. (Eur)* |
Beta(SE) (Eur)* |
p-value (Eur) |
p-value Het (Eur) |
Freq. (AA)* |
Beta(SE) (AA)* |
p-value (AA) |
p-value Het(AA) |
p-value (Meta) |
p-value Het(Meta) |
Gene |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1p31 | rs1805096 | G/A | 0.38 | −0.098(0.009) | 3.3×10−30 | 0.013 | 0.45 | −0.061(0.017) | 2.5×10−4 | 0.98 | 5.6×10−32 | 0.044 | LEPR |
1q21 | rs4129267 | C/T | 0.40 | −0.079(0.008) | 5.2×10−21 | 0.32 | 0.13 | −0.12(0.025) | 5.7×10−7 | 0.52 | 8.0×10−26 | 0.28 | IL6R |
1q23 | rs3091244 | A/G | 0.62 | −0.17(0.009) | 3.5×10−91 | 0.34 | 0.45 | −0.24(0.017) | 5.1×10−45 | 0.11 | 7.8×10−132 | 0.011 | CRP |
1q44 | rs12239046 | C/T | 0.39 | −0.039(0.009) | 5.3×10−6 | 0.93 | 0.51 | −0.064(0.017) | 1.4×10−4 | 0.98 | 7.3×10−9 | 0.98 | NLRP3 |
2p23 | rs1260326 | C/T | 0.43 | 0.094(0.008) | 5.3×10−29 | 0.57 | 0.14 | 0.056(0.024) | 0.019 | 0.63 | 1.0×10−29 | 0.57 | GCKR |
2q13 | rs4251961 | T/C | 0.38 | 0.060(0.009) | 1.4×10−12 | 0.37 | 0.18 | 0.081(0.022) | 2.0×10−4 | 0.055 | 1.8×10−15 | 0.12 | IL1RN |
7q11 | rs714052 | A/G | 0.12 | −0.065(0.013) | 3.9×10−7 | 0.75 | 0.042 | −0.056(0.044) | 0.20 | 0.80 | 1.7×10−7 | 0.91 | BAZ1B |
7q21 | rs3211938 | T/G | <0.001 | −0.42(0.54) | 0.44 | 0.96 | 0.085 | −0.14(0.030) | 1.6×10−6 | 0.22 | 1.4×10−6 | 0.40 | CD36 |
11p15 | rs6486121 | T/C | 0.37 | −0.043(0.009) | 6.4×10−7 | 0.91 | 0.58 | −0.037(0.017) | 0.026 | 0.098 | 1.3×10−7 | 0.57 | ARNTL |
12q24 | rs2244608 | A/G | 0.34 | −0.11(0.009) | 4.6×10−39 | 0.51 | 0.14 | −0.076(0.024) | 0.0016 | 0.65 | 9.5×10−41 | 0.54 | HNF1A |
17q23 | rs1292034 | G/A | 0.45 | −0.037(0.008) | 6.0×10−6 | 0.043 | 0.82 | −0.039(0.02) | 0.079 | 0.53 | 1.2×10−6 | 0.13 | RPS6KB1 |
19q13 | rs2075650 | A/G | 0.13 | −0.18(0.012) | 2.2×10−47 | 0.59 | 0.13 | 0.039(0.02) | 0.11 | 0.75 | 1.9×10−34 | 1.7×10−9 | TOMM40 |
20q13 | rs1800961 | C/T | 0.030 | −0.13(0.024) | 2.0×10−7 | 0.63 | 0.0070 | −0.14(0.10) | 0.18 | 0.82 | 7.8×10−8 | 0.85 | HNF4A |
Allele frequencies and beta estimates are presented for second allele (A2).