Table 1.
Locus | Primer sequences (5′–3′) | Repeat motif | Size (bp)a | Primer conc. (mM) | Fluorescent dyeb | Multiplex sets | GenBank accession no. |
Tc4 | F: ATTTTAGAATGCCAACCTGCTAAG | T6(GT)12 | 224 | 0.2 | HEX | B | JQ289157 |
R: TATTGAAGTCCATTTCCAATTGTC | |||||||
Tc5 | F: TTTTCATACATTTAGAGACTTTTAGCA | (AG)12 | 150 | 0.2 | FAM | D | JQ289158 |
R: TGCATGATTTGTATGTTTAGGG | |||||||
Tc6 | F: CCATATCTTCTGCCAGTTTTCC | (AG)12 | 143 | 0.2 | HEX | A | JQ289159 |
R: GGACTAATTTCTTCCTTTTATTAGGC | |||||||
Tc7 | F: TTTACTTTTGCCAGTTGTGAGG | (GA)13 | 234 | 0.1 | FAM | D | JQ289160 |
R: CACCTAGAATGCCTCCTATTCG | |||||||
Tc8 | F: CGAAGAAACTGTCAAAACAACG | (GA)13 | 160 | 0.1 | HEX | B | JQ289161 |
R: AGCTGGGTTTTAGAGGATAGGG | |||||||
Tc11 | F: AGCTATGAAAGAACTATCAAGAGAAAG | (AG)13 | 146 | 0.1 | NED | C | JQ289162 |
R: CCCCAAGACATTGCAGTAGAAC | |||||||
Tc31 | F: TTTGCAAAGACTACTCCAAGAATC | (GA)12 | 205 | 0.2 | FAM | B | JQ289164 |
R: AAATCGATGGTCAAGAACTAAATC | |||||||
Tc915 | F: ACATCGATTGTATTTCCCTTTAAC | (CT)16 | 165 | 0.2 | HEX | C | JQ289165 |
R: GTTGTATTTTGCCCTTAACATTG | |||||||
Tc918 | F: AACGGCTAATTACTCCTAGTTTCG | (AC)9(TC)2 | 240 | 0.2 | HEX | A | JQ289166 |
R: TGTTCAGCTCACTACTACCTTTCAC | |||||||
Tc920 | F: AAATGTCTTCAGAGTGACTAGATGG | (GA)2(GT)15(AG)4 | 232 | 0.1 | FAM | A | JQ289167 |
R: TGCCTCATTATTCTCCTAATTCTC | |||||||
Tc927 | F: AGTCCTCCTGTCAAATGCTG | (AG)10 | 157 | 0.1 | FAM | C | JQ289168 |
R: ATCACACTCGTTTATGACATCTTG | |||||||
Tc937 | F: AGCCAACCAACTTTTACAATACAG | (AG)13 | 162 | 0.1 | NED | A | JQ289169 |
R: AGATAAAAGCACATAAATCGATGG | |||||||
Tc943 | F: ATTTCATCTTTCTCTAAAGCCTTG | (CA)10 | 150 | 0.2 | FAM | B | JQ289170 |
R: GGGAAAGCCTGTGTTAGTTTC | |||||||
Tc951 | F: TGTTATGACCTCACTTATAACCAAGT | (CT)12 | 160 | 0.2 | NED | D | JQ289171 |
R: GGGTGAGCTGACAATATAGAAGAG | |||||||
Tc963 | F: CTAACCCCATTCTCTTTAATTCTG | (CT)11 | 238 | 0.2 | HEX | C | JQ289172 |
R: GCTTTCATTTCAGTTTTCCTCTAC |
Size of the original fragment.
Fluorescent label on the forward primer.