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. 2014 Jun 6;57(13):5602–5619. doi: 10.1021/jm5002277

Table 9. Set of Six 2D Descriptors Selected by BestFirst Algorithm for Classification Studies.

name definition
density molecular mass density: weight divided by vdw_vol (amu/Å3)
lip_don no. of OH and NH atoms
opr_brigid no. of rigid bonds53
PEOE_RPC+ numeric relative positive partial charge: largest positive qi divided by the sum of positive qi
PEOE_VSA+3 sum of vi where qi is in the range [0.15, 0.20)
SMR molecular refractivity (including implicit hydrogens)a
a

This property is an atomic contribution model54 that assumes the correct protonation state (washed structures). The model was trained on ∼7000 structures and results may vary from the mr descriptor.