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. 2014 Jul 23;9(7):e102730. doi: 10.1371/journal.pone.0102730

Table 1. Oligonucleotides used in this study. Underline indicates mutated nucleotides.

Oligonucleotide Sequence Used for
pGL-P2 ΔKpnl Mu1F 5′ TCTCTATCGATA-TGCCCTTAGCTA 3′ Δ1 Mutant
pGL-P2 ΔKpnl Mu1R 5′ TAGCTAAGGGCA-TATCGATAGAGA 3′
pGL-P2 ΔKpnl Mu2F 5′ TCTAATTCCTCG-GACCTCTTCTGT 3′ Δ2 Mutant
pGL-P2 ΔKpnl Mu2R 5′ ACAGAAGAGGTC-CGAGGAATTAGA 3′
pGL-P2 ΔKpnl Mu3F 5′ CGTTTCTCCTGC-TACGTGCATCTG 3′ Δ3 Mutant
pGL-P2 ΔKpnl Mu3R 5′ CAGATGCACGTA-GCAGGAGAAACG 3′
pGL-P2 ΔKpnl Mu4F 5′ TCTGCTAAAGAG-AACCCCCGTGCA 3′ Δ4 Mutant
pGL-P2 ΔKpnl Mu4R 5′ TGCACGGGGGTT-CTCTTTAGCAGA 3′
pGL-P2 ΔKpnl Mu5F 5′ CAGCACCGCTCC-CGGTTTGAAGAG 3′ Δ5 Mutant
pGL-P2 ΔKpnl Mu5R 5′ CTCTTCAAACCG-GGAGCGGTGCTG 3′
pGL-P2 ΔKpnl Mu6F 5′ CTGTTATGGTTG-CTCGAGTGAATG 3′ Δ6 Mutant
pGL-P2 ΔKpnl Mu6R 5′ CATTCACTCGAG-CAACCATAACAG 3′
(−465/−460)mut_F 5′ TAAAGAGTACGTGg AatTcGCAGCACCGCTCC 3′ MuE1 mutant
(−465/−460)mut_R 5′ GGAGCGGTGCTGCg AatTcCACGTACTCTTTA 3′
(−442/−437)mut_F 5′ CACCGCTCCAACCgaat TcCATCTGTTATGG 3′ MuE2 mutant
(−442/−437)mut_R 5′ CCATAACAGATGg AattcGGTTGGAGCGGTG 3′
(−436/−431)mut_F 5′ TCCAACCCCCGTGg AatTcTTATGGTTGCGGT 3′ MuE3 mutant
(−436/−431)mut_R 5′ ACCGCAACCATAAg AatTcCACGGGGGTTGGA 3′
(−408/−403)mut_F 5′ GGTTTGAAGAGAg AatTcCTACTCGAtTcAATGAATTGC 3′ MuE4 mutant
(−408/−403)mut_R 5′ CTGCAATTCATTg AaTCGAGTAGg AatTcTCTCTTCA 3′
USF2CDS-F 5′ AAGCTTATGGACATGCTGGACCCGGGTCTG 3′ USF2 cloning
USF2CDS-R 5′ GGTACCTCACTGCCGGGTGCTCTCGCCC 3′
USF1CDS-F 5′ AAGCTTATGAAGGGGCAGCAGAAAACAGC 3′ USF1 cloning
USF1CDS-R 5′ GTACCTTAGTTGCTGTCATTCTTGATGAC 3′
M4 (+) 5′ GCTAAAGAGTACGTGCATCTGGCAGCACCG 3′ EMSA
M4 (−) 5′ CGGTGCTGCCAGATGCACGTACTCTTTAGC 3′
M5 (+) 5′ CCAACCCCCGTGCATCTGTTATGGTTGCGG EMSA
M5 (−) 5′ CCGCAACCATAACAGATGCACGGGGGTTGG 3′
M5pmut E-box2 (+) 5′ CCAACCGAATTCCATCTGTTATGGTTGCGG 3′ EMSA
M5pmut E-box2 (−) 5′ CCGCAACCATAACAGATGGAATTCGGTTGG 3′
M4+M5 (+) 5′ CATCTGGCAGCACCGCTCCAACCCCCGTGCATCTG 3′ EMSA
M4+M5 (−) 5′ CAGATGCACGGGGGTTGGAGCGGTGCTGCCAGATG 3′
M4/5pmut (+) 5′ CATCTGGCAGCAGAATTCCAACCgaat TcCATCTG EMSA
M4/5pmut (−) 5′ CAGATGg AattcGGTTGGAGCGGTGCTGCCAGATG 3′
HHS Vulnerability Disclosure