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. 2014 Mar 7;76(6):877–885. doi: 10.1292/jvms.14-0028

Table 2. Species- and genus-specific primers for the quantification of ruminal bacteria using real-time PCR assay.

Bacteria Primer Sequence (5′- 3′) Source
Lactobacillus plantarum Sg-Lpla-F CTCTGGTATTGATTGGTGCTTGCAT [22]
Sg-Lpla-R GTTCGCCACTCACTCAAATGTAAA
Enterococcus spp. g-Bfra-F CCCTTATTGTTAGTTGCCATCATT [31]
g-Bfra-R ACTCGGTTGTACTTCCCATTGT
Clostridium butyricum 209F25 AGTGATTGTCAGTAGTAGACGAGCG [26]
R221 CATGCGCCCTTTGTAGC
Clostridium coccoides g-Coc-F AAATGACGGTACCTGACTAA [23]
g-Coc-R CTTTGAGTTTCATTCTTGCGAA
Megasphaera elsdenii MegEls1F GACCGAAACTGCGATGCTAGA [13]
MegEls1R CGCCTCAGCGTCAGTTGTC
Selenomonas ruminantium SelRum1F GGCGGGAAGGCAAGTCAGTC [13]
SelRum1R CCTCTCCTGCACTCAAGAAAGACAG