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The percentage of trimmed reads that mapped to the CCMP 1984 gene models and the two CCMP 1850 de novo assemblies.
| Replete | Low N% | Low P% | Low light% | |
|---|---|---|---|---|
| 1984 gene models | 97.8 | 90.1 | 93.3 | 94.1 |
| 1850 Trinity assembly | 91.8 | 93.1 | 93.0 | 93.3 |
| 1850 ABySS assembly | 93.9 | 94.6 | 95.7 | 95.0 |
Values were determined using Bowtie 2 with the “–sensitive” parameter (Langmead and Salzberg, 2012).
