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. 2014 Jun 12;289(30):21191–21202. doi: 10.1074/jbc.M114.559773

TABLE 2.

Data collection and refinement statistics

Values in parenthesis are for the highest resolution shell.

Se-Met YafQ-DinJ YafQ-DinJ native Se-Met YafQ (H87Q) WT YafQ YafQ (H87Q)
Data collection
    Wavelength (Å) 0.9791 1.0 0.9792 1.0 1.0
    Space group C2 C2 I23 C2221 P1
    Unit-cell parameters a = 175.31 Å, b = 119.79 Å, c = 119.72 Å, β = 130.11° a = 175.90 Å, b = 120.25 Å, c = 120.20 Å, β = 130.40° a = b = c = 125.45 Å a = 41.30Å, b = 89.83Å, c = 75.02Å a = 41.84Å, b = 42.49Å, c = 43.28Å, α = 109.93°, β = 106.12°, γ = 102.07°
    Resolution (Å) 2.50 (2.54-2.50)a 2.10 (2.14-2.10) 3.00 (3.05-3.00) 1.50 (1.53-1.50) 1.50 (1.53-1.50)
    Unique reflections 64,984 (3233) 111,791 (5575) 6735 (339) 22,814 (1104) 39,481 (1853)
    Completeness (%) 99.9 (100) 99.9 (100) 100 (100) 100 (100) 96.3 (92.9)
    Redundancy 7.5 (7.5) 4.9 (5.0) 29.9 (30.3) 10.0 (6.9) 3.9 (2.4)
    Mean I/σ(I) 45.41 (10.52) 32.98 (9.32) 27.21 (11.04) 72.47 (16.23) 45.35 (8.25)
    Molecules in asymmetric unit 16 16 2 1 2
    Rmerge (%) 13.2 (44.4) 10.2 (45.8) 20.7 (47.6) 6.2 (16.7) 4.8 (12.2)

Structure refinement
    Resolution range (Å) 43.71–2.10 28.79–1.50 26.26–1.50
    Rwork/Rfree (%) 17.68/21.51 17.64/18.92 16.48/18.87
    Average B factor (Å2)
        Main chain 23.10 11.95 12.38
        Side chain 27.59 16.10 15.89
        Ligand (SO42−) 36.07 25.71 30.29
        Waters 31.80 31.58 28.57
    No. of atoms
        Residues 1387 90 181
        Protein 11,148 769 1532
        Ligand (SO42−) 42 5 5
        Waters 1223 217 430

Ramachandran plot (%)
    Most favored 99.56 98.89 98.88
    Allowed 0.44 1.11 1.12
    Root mean square deviations
        Bond lengths (Å) 0.008 0.006 0.005
        Bond angles (degrees) 1.063 1.084 1.112

a Values in parentheses are for the highest resolution shell.