Table 1.
Marker name | chr | Missing | d AR | d RAR | d Nei | d PIC | d SWI | |
---|---|---|---|---|---|---|---|---|
barc019 | 3A | 0.0 | 16 | 8 | 7.9 | 0.74 | 0.71 | 1.71 |
barc021 | 7A | 2.7 | 16 | 6 | 8.4 | 0.58 | 0.57 | 1.46 |
barc029 | 7A | 1.7 | 12 | 6 | 5.8 | 0.61 | 0.57 | 1.28 |
barc032 | 5B | 0.9 | 16 | 5 | 9.9 | 0.83 | 0.81 | 2.06 |
barc096 | 6D | 0.2 | 16 | 12 | 5.1 | 0.53 | 0.47 | 1.07 |
barc097 | 7BD5B | 16.9 | 11 | 6 | 5.8 | 0.74 | 0.70 | 1.52 |
barc107 | 6A | 0.9 | 14 | 8 | 6.2 | 0.50 | 0.46 | 1.12 |
barc110 | 5D | 0.3 | 29 | 14 | 14.9 | 0.93 | 0.92 | 2.75 |
barc127 | 6B | 0.4 | 19 | 12 | 8.2 | 0.83 | 0.81 | 1.97 |
barc134 | 6B | 11.2 | 20 | 12 | 9.0 | 0.80 | 0.78 | 1.93 |
barc164 | 3B | 0.1 | 29 | 16 | 13.3 | 0.86 | 0.85 | 2.42 |
barc172 | 7BD5B | 0.0 | 11 | 3 | 6.8 | 0.77 | 0.74 | 1.67 |
barc240 | 1ABD5B | 0.1 | 33 | 18 | 13.1 | 0.85 | 0.83 | 2.37 |
cfd079.a | 3ABD | 8.4 | 26 | 9 | 14.5 | 0.91 | 0.90 | 2.65 |
cfd079.b | 3ABD | 14.0 | 13 | 8 | 6.5 | 0.74 | 0.70 | 1.59 |
gdm111 | 1D | 7.8 | 13 | 5 | 7.3 | 0.75 | 0.71 | 1.64 |
gdm129 | 4D | 0.0 | 8 | 5 | 3.4 | 0.22 | 0.21 | 0.49 |
gwm003* | 3D | 0.0 | 16 | 9 | 7.2 | 0.69 | 0.66 | 1.56 |
gwm018* | 1B | 0.6 | 15 | 7 | 7.8 | 0.74 | 0.71 | 1.69 |
gwm030.a | 2D3A | 23.2 | 16 | 8 | 9.0 | 0.79 | 0.77 | 1.91 |
gwm030.b | 2D3A | 10.4 | 28 | 9 | 16.9 | 0.93 | 0.93 | 2.88 |
gwm046* | 7B | 1.6 | 28 | 10 | 15.1 | 0.91 | 0.91 | 2.71 |
gwm095* | 2A | 0.0 | 14 | 7 | 7.7 | 0.81 | 0.79 | 1.86 |
gwm155* | 1D3A | 0.5 | 24 | 13 | 10.1 | 0.80 | 0.78 | 2.01 |
gwm190* | 5D | 0.6 | 22 | 12 | 9.9 | 0.84 | 0.83 | 2.12 |
gwm213* | 5B | 1.5 | 46 | 19 | 23 | 0.96 | 0.95 | 3.38 |
gwm219* | 6B | 0.0 | 30 | 11 | 16.0 | 0.91 | 0.91 | 2.76 |
gwm291* | 5A | 13.0 | 29 | 12 | 15.0 | 0.87 | 0.86 | 2.56 |
gwm312* | 2A | 0.1 | 43 | 25 | 17.3 | 0.89 | 0.88 | 2.80 |
gwm337 | 1D | 3.3 | 25 | 11 | 12.6 | 0.88 | 0.87 | 2.43 |
gwm357* | 1A | 0.1 | 11 | 4 | 6.1 | 0.73 | 0.69 | 1.53 |
gwm437* | 7D | 0.0 | 26 | 8 | 16.3 | 0.93 | 0.93 | 2.83 |
gwm456* | 3D | 0.1 | 18 | 7 | 10.1 | 0.84 | 0.82 | 2.10 |
gwm526.a | 2B | 3.7 | 7 | 3 | 4.2 | 0.62 | 0.58 | 1.18 |
gwm526.b | 2B | 3.5 | 15 | 6 | 8.5 | 0.77 | 0.74 | 1.80 |
gwm539 | 2D | 0.4 | 61 | 34 | 23.5 | 0.96 | 0.96 | 3.45 |
gwm570* | 6A | 0.0 | 26 | 14 | 12.7 | 0.89 | 0.88 | 2.45 |
gwm608.a | 2D4D6B | 21.4 | 6 | 0 | 6.0 | 0.80 | 0.77 | 1.70 |
gwm608.c | 2D4D6B | 0.7 | 20 | 9 | 11.3 | 0.89 | 0.88 | 2.38 |
psp3100 | 1B | 0.6 | 54 | 36 | 17.6 | 0.92 | 0.92 | 2.95 |
wmc093 | 1AD | 1.1 | 9 | 7 | 2.7 | 0.51 | 0.39 | 0.78 |
wmc105 | 6B | 4.1 | 40 | 20 | 18.5 | 0.91 | 0.90 | 2.90 |
wmc110 | 5A | 22.4 | 3 | 0 | 2.7 | 0.34 | 0.29 | 0.59 |
wmc154 | 2B | 0.6 | 38 | 28 | 11.5 | 0.78 | 0.76 | 2.11 |
wmc168 | 7A | 12.3 | 34 | 14 | 15.3 | 0.80 | 0.79 | 2.40 |
mean (SSRs) | 4.2 | 22.4 | 11.0 | 11.1 | 0.78 | 0.75 | 2.09 | |
min (SSRs) | 0.0 | 3 | 0 | 2.7 | 0.22 | 0.21 | 0.49 | |
max (SSRs) | 23.2 | 61 | 36 | 24.9 | 0.96 | 0.96 | 3.45 |
Ppd-A1 | 2A | 3.4 | 3 | 1 | 1.2 | 0.14 | 0.13 | 0.29 |
Ppd-B1 | 2B | 1.8 | 5 | 2 | 1.4 | 0.23 | 0.22 | 0.49 |
Ppd-D1 | 2D | 0.0 | 7 | 2 | 2.0 | 0.61 | 0.56 | 1.16 |
Vrn-A1 | 5A | 9.7 | 5 | 2 | 1.2 | 0.16 | −1.25 | 0.4 |
Vrn-B1 | 5B | 18.6 | 4 | 0 | 1.9 | 0.56 | 0.45 | 1.00 |
Vrn-D1 | 5D | 18.1 | 4 | 1 | 1.5 | 0.29 | 0.27 | 0.60 |
Markers shared with Gediflux collection are indicated by a* after the marker name
chr putative chromosomal locations according to Gramene database (http://www.gramene.org/markers), d AR allele richness, d RAR number of rare alleles, allele richness after rarefaction, d Nei Nei’s gene diversity, d PIC polymorphic information content, d SWI Shannon–Weaver Diversity Index