Table 2.
Origin and closest relatives of excised DGGE bands.
| DGGE Band | Genbank accession | Biomass | Closest relative from blastn (accession number) | Similarity (%) |
|---|---|---|---|---|
| A. ORIGIN AND CLOSEST RELATIVES OF EXCISED ARCHAEAL DGGE BANDS | ||||
| 1 | FJ535442 | R2 day 304 | Uncultured archaeon gene | 100 |
| 2 | FJ535443 | R1 day 304 | Uncultured archaeon gene | 99 |
| 4 | FJ535444 | R1 day 304 | Uncultured archaeon clone TDC-AR4 | 98 |
| 5 | FJ535445 | R1 day 304 | Uncultured Methanosaeta species | 99 |
| 6 | FJ535446 | R1 day 742 | Uncultured archaeon clone SCA49 | 98 |
| 7 | FJ535447 | R2 day 742 | Uncultured archaeon clone 06-02-208 | 98 |
| B. ORIGIN AND CLOSEST RELATIVES OF EXCISED BACTERIAL DGGE BANDS | ||||
| 1 | FJ535448 | R2 day 304 | Uncultured delta proteobacterium clone 1R2U70 | 100 |
| 2 | FJ535449 | R1 day 304 | Uncultured bacterium clone FLSED43 | 94 |
| 3 | FJ535450 | R2 day 304 | Uncultured bacterium clone FLSED43 | 92 |
| 4 | FJ535451 | R1 day 515 | Uncultured bacterium clone FLSED5 | 95 |
| 5 | FJ535452 | R1 day 136 | Uncultured bacterium clone 32g06 | 99 |
| 6 | FJ535453 | R1 day 742 | Uncultured delta proteobacterium clone 1R2U28 | 98 |
| 10 | FJ535454 | R2 day 515 | Uncultured delta proteobacterium clone 1R2U70 | 100 |
| 11 | FJ535455 | R2 day 742 | Chlorobium limicola DSM 245, complete genome | 99 |
| 12 | FJ535456 | R2 day 742 | Chlorobaculum tepidum partial 16S rRNA gene | 97 |
| C. ORIGIN AND CLOSEST RELATIVES OF EXCISED SRB DGGE BANDS | ||||
| 1 | FJ535457 | R2 day 304 | Uncultured bacterium clone NTUA-5A-DSR2 dsrA and dsrB genes, partial cds | 99 |
| 2 | FJ535458 | Day 0 | Desulfobacterium autotrophicum partial dsrA and dsrB genes | 87 |
| 3 | FJ535459 | R2 day 136 | Uncultured sulfate-reducing bacterium isolate DGGE gel band 08 dsrB gene, partial cds | 82 |
| 4 | FJ535460 | R1 day 136 | Uncultured sulfate-reducing bacterium isolate DGGE gel band 08 dsrB gene, partial cds | 82 |
| 5 | FJ535461 | R1 day 136 | Uncultured sulfate-reducing bacterium clone GranDSR8 dsrA and dsrB genes, partial cds | 98 |
| 6 | FJ535462 | R1 day 136 | Uncultured sulfate-reducing bacterium isolate DGGE gel band 08 dsrB gene, partial cds | 81 |
| 7 | FJ535463 | R2 day 136 | Uncultured bacterium clone NTUA-5A-DSR2 dsrA and dsrB genes, partial cds | 99 |
| 8 | FJ535464 | R1 day 304 | Uncultured bacterium clone NTUA-5A-DSR2 dsrA and dsrB genes, partial cds | 99 |
| 9 | FJ535465 | R2 day 515 | Uncultured bacterium clone NTUA-5A-DSR2 dsrA and dsrB genes, partial cds | 99 |
| 10 | FJ535466 | R1 day 304 | Desulfomicrobium sp. ADR28 partial dsrA gene and partial dsrB gene, strain ADR28 | 95 |