Table 1.
Sequencing | No. of sequences | Bases |
---|---|---|
Raw sequencing reads | 2 141 048 | 848 713 419 |
Average read length | 396 | |
Pre-assembly | ||
Trashed | 1337 | 3 795 275 |
Reads used in assembly | 2 139 711 | 844 918 144 |
Average read length | 395 | |
Assembly | ||
Contigs | ||
Reads assembled as contigs | 1 453 995 | 558 385 452 |
Number of contigs | 62 636 | 36 715 613 |
Average length of contigs | 589 | |
Isotigs | ||
Number of isotigs | 34 947 | 54 330 087 |
Average length of isotigs | 1555 | |
Isotig N50 | 1737 | |
Number of isogroups | 18 482 | |
Singletons | 17 364 |