Table 4.
Haplotype Frequency Estimates of the TCblR Dā Block*
| Haplotype | Controls | NTD cases | NTD mothers |
|---|---|---|---|
| GCTdelCGG | 0.33 | 0.32 | 0.30 |
| GGTdelCGG | 0.24 | 0.24 | 0.24 |
| AGCdelCGG | 0.19 | 0.21 | 0.21 |
| GGTdelCCG | 0.10 | 0.10 | 0.11 |
| GGCdelCGA | 0.10 | 0.07 | 0.09 |
| GCTdelTGG | 0.02 | 0.03 | 0.02 |
| GCTinsTGG | 0.02 | 0.03 | 0.01 |
| GGCdelCGG | 0.01 | 0.01 | 0.01 |
| p-value | 0.3** | 1.0** |
The haplotype block consists of the following markers: rs4147651, rs7408841, rs2927707, E88del, rs2336573 (G220R), rs2227288, rsl73665.
Result of permutation test for significant differences in haplotype frequencies in NTD cases vs. controls or NTD mothers vs. controls.