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. 2014 Jul 28;9(7):e102649. doi: 10.1371/journal.pone.0102649

Table 1. Descriptive statistics of sequencing to determine the microbiotoa for each individual.

Sample ID number of reads coverage npshannon index Number of OTU total Number of OTU >10 reads
92 229 0.955975 1.690045 76 19
93 1584 0.99131 0.436879 74 28
94 669 0.977401 1.507996 242 20
95 738 0.986166 1.416086 226 27
96 503 0.953079 1.395581 149 29
97 385 0.946203 1.774329 86 33
98 955 0.98389 0.663968 79 30
99 770 0.978852 1.306709 114 29
100 1018 0.985946 0.658787 107 30
101 1482 0.994792 0.842304 188 21
102 1667 0.992283 0.691189 96 31
103 711 0.99179 0.946539 97 23
104 1072 0.987599 0.719994 159 25
105 1662 0.991645 0.371924 73 26
106 1304 0.995734 0.658557 93 18
107 1617 0.99416 0.290016 49 21
108 1237 0.990451 0.634742 73 30
109 1063 0.987778 0.679124 137 26
110 752 0.97281 0.656197 105 29
111 731 0.986217 0.63276 79 22
112 628 0.975779 0.630137 63 23
113 892 0.983549 0.446389 49 24
114 1333 0.993127 0.713271 127 22
115 1109 0.983313 1.020009 266 35
116 532 0.967611 2.709733 269 32
117 649 0.963145 2.108945 237 41
118 404 0.923977 2.645631 222 29
119 969 0.97625 1.019139 177 40
120 581 0.967647 1.975631 205 26
121 468 0.948413 2.692236 202 34
122 744 0.980551 0.876389 117 27
123 953 0.983204 0.832745 133 32
124 530 0.967846 2.29117 186 30
125 797 0.977901 0.703269 79 30
126 411 0.97561 0.904985 116 18
127 242 0.76 3.452235 182 32
128 1230 0.989637 0.504536 69 26
129 831 0.978723 1.537117 115 41
130 1449 0.983421 0.548428 123 38
131 499 0.969697 2.118408 144 29
132 431 0.945813 2.133064 181 25
133 494 0.96114 1.408929 117 35
134 746 0.980254 0.508333 38 22
135 662 0.977887 2.41624 180 36
136 754 0.987755 0.956343 118 18
137 2008 0.993154 0.557917 74 30
138 714 0.976619 1.632525 101 36
139 798 0.967632 1.534968 129 35
140 469 0.917197 3.267019 261 35
141 224 0.980892 0.662835 33 6
142 517 0.957377 2.388226 180 36
143 483 0.947195 2.446711 157 36
144 414 0.958848 3.124298 188 38
145 930 0.975443 1.391363 168 43
146 769 0.979661 2.024708 140 28
147 1219 0.995122 1.641489 118 17
148 1254 0.98244 1.127563 148 40
149 1074 0.972678 2.309049 318 55
150 1108 0.980583 2.793443 321 47
151 3082 0.998643 0.332436 58 16
152 1429 0.996561 1.820656 203 25
153 1955 0.995286 0.815557 167 27
154 1449 0.983366 1.74373 354 54
155 1074 0.973611 1.716763 321 41
156 1016 0.989316 0.588719 62 21
157 1483 0.984836 1.374063 216 46
158 2004 0.998944 0.791157 44 10
159 2043 0.997359 0.812388 92 18
160 2468 0.995741 0.305525 70 23
161 1215 0.979566 1.928985 346 48
162 1904 0.995286 0.821609 164 37
163 1046 0.985799 1.569251 188 40
164 1145 0.993814 0.744587 98 19
165 995 0.981481 1.421104 243 37
166 725 0.97921 2.459141 211 36
167 727 0.988743 2.142562 131 24
168 841 0.98908 2.297402 151 31
169 552 0.968116 2.76388 178 35
170 1204 0.99177 1.912832 162 32
172 2010 0.993946 0.610072 155 36
173 1454 0.987296 1.893132 316 51
174 1056 0.979651 2.949199 335 53
175 824 0.95098 2.845177 368 46
176 851 0.96729 2.039242 202 47
177 778 0.985507 2.23077 221 25
178 2142 0.998093 0.359619 52 13

The coverage was estimated by a Good's estimator index. npshannon: non parametric index of Shannon. OTU classification was done with a treshold of 97% identity.