Figure 2. Percentages of plant and fungal transcripts in B. napus cotyledons, uninoculated or at 7 and 14 days post-inoculation dpi with L. maculans ‘brassicae’ (Lmb) or L. biglobosa ‘canadensis’ (Lbc).

B. napus cotyledons were infected with Lmb, Lbc or water (control mock inoculum). Total RNA was extracted from lesion tissue at 7 and 14 dpi for Illumina RNA-seq sequencing. The percentage of reads aligned to the Brassica exon array unigene set (green) or the reference genomes for Lmb or Lbc (blue) is presented, as well as a photo of each representative infection. All of the aligned sequence reads were deposited at the NCBI Sequence Read Archive (SRA), accessible under bioproject accession SRP035525.