Table 5.
Genetic diversity and effective population size of six populations of C. simplicpinna based on sixteen SSR loci
| Population | N T | N P | A R | N A | N E | I | H O | H E | F | HWE ( P ) | PPB (%) | Ne |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| LUA |
97 |
14 |
5.014 |
6.063 |
3.521 |
1.268 |
0.473 |
0.603 |
0.197 |
0.000*** |
100 |
164.9 |
| LU |
91 |
6 |
4.835 |
5.688 |
3.402 |
1.220 |
0.459 |
0.589 |
0.228 |
0.000*** |
100 |
33.9 |
| MM |
46 |
1 |
2.628 |
2.875 |
1.925 |
0.635 |
0.306 |
0.353 |
0.156 |
0.000*** |
81.25 |
56.6 |
| ML |
53 |
6 |
3.312 |
3.313 |
2.310 |
0.773 |
0.330 |
0.418 |
0.190 |
0.002** |
75.00 |
24.8 |
| NZD |
64 |
6 |
3.889 |
4.000 |
2.385 |
0.885 |
0.441 |
0.457 |
0.093 |
0.477ns |
93.75 |
43.7 |
| NBH |
63 |
8 |
3.417 |
3.938 |
2.292 |
0.846 |
0.387 |
0.442 |
0.154 |
0.000*** |
93.75 |
106.1 |
| Mean | 69 | 6.83 | 3.849 | 4.313 | 2.639 | 0.938 | 0.394 | 0.447 | 0.170 | 90.63 | 71.7 |
Note: NT, number of total alleles; NP, number of private alleles; AR, allelic richness; NA, number of alleles; NE, effective number of alleles; I, information index; HO, observed heterozygosity; HE, expected heterozygosity; F, fixation index; HWE, Hardy-Weinberg equilibrium; PPB, percentage of polymorphic loci; Ne, effective population size.-, Monomorphic; *, P < 0.05; **, P < 0.01; ***, P < 0.001.